Gene Cphamn1_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1427 
Symbol 
ID6375105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1550188 
End bp1551276 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content46% 
IMG OID642683922 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_001959836 
Protein GI189500366 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA GCAAAACCAA CATAAAAGCG TATACACGTC AGGAGCTGCG CGATACTATC 
GCAGCTCTTG GCGAACCGGC GTACCGTGCT GATCAGATTC ATCGATGGCT TTTCAGTGAT
TGGGTCACTG ATTTCGAAAA GATGAAAAAC ATCAGCGCGT CACTCAGAGA AGAGTTATCC
CGGCGATATG TCATCCCTTC ATGCTCATTC GAAAATGAAG CGATAGAAGA ACGTTCAGTG
AGCGCTCCGG AAACATCCAA GTTCCTGGTA GGCCTGCATG ACGATGAAAT GGTTGAAACA
GTCCTTATCC CCTCTCCGGA TCGTCATACG GTCTGCGTTT CTTCACAGGT AGGGTGCCCC
TTACGCTGCA CCTTCTGCGC AACCGGATAT ATGGGTTTTA CACGAAACCT TCTTGCATCG
GAAATCGTCG AACAGGTACT GCTCGTCAAC GAGAGGCTTG GCGATCGATC CCCGGATAAT
CATGTCACCA ATATGGTATT TATGGGTATG GGCGAACCCC TGCTCAACCT GAACAATGTT
TTTGACGCGA TAGAAACGCT GACAAATCAG TCCTATAATT TTTCGCTGTC CCGGAAAAGA
ATCACCATTT CAACCGTCGG CCTGATCCCG CAAATCGGTG AACTTGCCCG CTCTGGCCTT
TCAATCAAAC TGGCAATATC GCTCCATGCG GCAGACCAGG AAAAAAGAAC GTCATTGATC
CCTGTTGCCA AGGAACATAC TCTTGAAGAG CTGCGCCATG CGCTTCATGA GTATGCCGAT
ATGGTAAAAG AGCCGGTCAC ACTTGTCTAT ATGCTTATAG AAGGGGTCAA TGATGCGGAT
CAGGACGCCA TTAACCTCAT ACGGTTCGCT CAAGGTTTTT TATGCAAAAT AAATTTAATT
GATTATAATT GTATAGTTAA TGTGAAGTTC AATCCTGTAA AGGCAGAGAA AAGAGATCGA
TTTATACATA CCCTTGTCAA TGCAGGTGTG CATGTGACGG TACGTAAAAG TCAGGGGGCT
TCAATCGATG CTGCTTGCGG TCAACTGGCT TTACAGAAAA AAAACAAAAC TGCATCCAGA
CCGTATTAA
 
Protein sequence
MPNSKTNIKA YTRQELRDTI AALGEPAYRA DQIHRWLFSD WVTDFEKMKN ISASLREELS 
RRYVIPSCSF ENEAIEERSV SAPETSKFLV GLHDDEMVET VLIPSPDRHT VCVSSQVGCP
LRCTFCATGY MGFTRNLLAS EIVEQVLLVN ERLGDRSPDN HVTNMVFMGM GEPLLNLNNV
FDAIETLTNQ SYNFSLSRKR ITISTVGLIP QIGELARSGL SIKLAISLHA ADQEKRTSLI
PVAKEHTLEE LRHALHEYAD MVKEPVTLVY MLIEGVNDAD QDAINLIRFA QGFLCKINLI
DYNCIVNVKF NPVKAEKRDR FIHTLVNAGV HVTVRKSQGA SIDAACGQLA LQKKNKTASR
PY