Gene Cphamn1_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1419 
Symbol 
ID6375097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1542990 
End bp1543937 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID642683914 
Productprotein of unknown function DUF477 
Protein accessionYP_001959828 
Protein GI189500358 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.370568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA AACCCTTGTT TTTCTCACTC GTGATCCTGT TCTTTGTCAG CTCTTCTCTC 
TATGGCGCGG ATGTTCCCTA TCTGACCGGA CGGATCACCG ACAACGCGGA GATTCTGTCC
CCGGAGGTCA ACCGGTCACT GTCGGAAAGC CTGAAAGCGC ATGAAAAACG CACCAGGAAC
CAGATCGCTG TGCTGACGAT TCCCACTCTC GACGGTGAGA GCATCGAAGA TTACGCTGTC
AGGGTCTTCG AGTTATGGAA ACTCGGCCAG AAAGGGGAAG ATAACGGTGT GTTGATCGTA
GTGGTGCCTA ACGACAGGCG GATGCGTATC GAAGTCGGTT ACGGTCTCGA AGGAACGCTC
ACAGACGCAA TGGCAGGACG GATCATTCAA AACGTCATGA CGCCCAAATT CAAAAACGGA
GACTTCGATG CCGGCATCGC CGATGGGGCC GGGGCTGTGA TGGAAGTGCT CGAAGGCGGA
GCATTGCCGG AGACAGCTGT CAGGAGCGGT TCTGCGGAAA AGTCGAAATT CTTTGAAATG
GAAGGACCGG ACCTTTCGAT TACGGAACGT GTTCTCCTCG GGGCGTTTAT TTTCGGCATC
ATCGGACTGT TTACCGCGAT TGGGATCGTG ACGCCCGGTT TCGGGTGGTT CCTCTACTTG
TTCCTGATAC CGTTCTGGGC ATCCTTTCCG ATCGTTGTCC TGGGGTCAGA CGGCGCGTTT
AAACTATTTA TAGCGTATCT GATCGGCTTC CCGGTAGCAA AGTTGTATAT ACGAAACATC
GACTGGTATC AGAAAGCTCA AAAAGATCTG CGCACCAAGG GTAAGGCCTC GATCGGGGGT
ATGACGATCG GTTCCGGCAG TTCCGGCTCA TCGTGGTCCT CAGGCGGATC GGGTTTTTCA
GGCAGTGGCG GATCATCAGG CGGCGGCGGC GCGTCCGGTA GCTGGTAG
 
Protein sequence
MKTKPLFFSL VILFFVSSSL YGADVPYLTG RITDNAEILS PEVNRSLSES LKAHEKRTRN 
QIAVLTIPTL DGESIEDYAV RVFELWKLGQ KGEDNGVLIV VVPNDRRMRI EVGYGLEGTL
TDAMAGRIIQ NVMTPKFKNG DFDAGIADGA GAVMEVLEGG ALPETAVRSG SAEKSKFFEM
EGPDLSITER VLLGAFIFGI IGLFTAIGIV TPGFGWFLYL FLIPFWASFP IVVLGSDGAF
KLFIAYLIGF PVAKLYIRNI DWYQKAQKDL RTKGKASIGG MTIGSGSSGS SWSSGGSGFS
GSGGSSGGGG ASGSW