Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1407 |
Symbol | |
ID | 6375085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1523093 |
End bp | 1523980 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683902 |
Product | NmrA family protein |
Protein accession | YP_001959816 |
Protein GI | 189500346 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00226857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGAGAG TCCTTGTTGC CGGTGCTTCA GGGTATATCG GACGGTATGC CGCTGTGGCA TATAAAAAAA GAGGCTGGTT CGTGCGGGCG CTGGTTCGGG ACCGGGAAAA AGTCAAAACA CCCGGTCCAT CTGGTGAACC GGCGCTGGAA GGGGTTGTTG ATGAAATCGT CACGGGTGAC GCCACCAAAC CGGACTCGCT GCACGGTATC GCAGAGGGCA TCGACACGAT CTTCTCATCC ATGGGCCTGA GAAGCTCAAA ACCCGGCATG ACCTACCATG ACGTCGATTT TCTCGGCAAC GTCAACATCC TGCAGGAAGC CCTTCATGAT GAAGTACGGA AGTTCGTCTA CGTTTCCATC TTCAAAGCCG ATGAAATGAT GGAGATGCAG ATCGTCAAGG CTCATGAAGC ATTCGTCAAG GCACTGAAAG ATTCGGGTAT AGACTACTCC ATTCTGCGTC CGAACGCCTA TTTCCCCGAC ATGGCACAGT TCCAGAACAT GGCCGCTTCC GGCGTCATCG TCTGGCCCGG CGACGGGAGT ATGACCATCA ATCCGATCCA CGGCGAGGAT ATGGGAGAAA TCTGCGTTGA TGCAGCCGTT CCCGGTCATC GGGAGATCAA CATCGGCGGC CCGGACATCT TCACTTACAA AGAGCTGTTC ACCCTCTCCT TCACCACCAT CAACAAACAA CCAAGGATCA TCTTCATCCC CCTCTGGTTC GTCAAAAACG TTCATGCCTT CATAAAACCC CTGAACGCGC GTATCGCCGA CATGCTCTAC TTCGCCATCG CCGTCAACGA AATCGACAAC GCCGCGCCGC AGTACGGTGA GCATCACATG AAGGATTTTT TCGAAGAGTC TGGAGAGAAA AACGTATCAG CGAAATAA
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Protein sequence | MQRVLVAGAS GYIGRYAAVA YKKRGWFVRA LVRDREKVKT PGPSGEPALE GVVDEIVTGD ATKPDSLHGI AEGIDTIFSS MGLRSSKPGM TYHDVDFLGN VNILQEALHD EVRKFVYVSI FKADEMMEMQ IVKAHEAFVK ALKDSGIDYS ILRPNAYFPD MAQFQNMAAS GVIVWPGDGS MTINPIHGED MGEICVDAAV PGHREINIGG PDIFTYKELF TLSFTTINKQ PRIIFIPLWF VKNVHAFIKP LNARIADMLY FAIAVNEIDN AAPQYGEHHM KDFFEESGEK NVSAK
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