| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1381 |
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| Symbol | |
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| ID | 6375059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1498602 |
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| End bp | 1499735 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683877 |
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| Product | Patatin |
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| Protein accession | YP_001959791 |
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| Protein GI | 189500321 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.536122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000759695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTG CAGAAAGGAT TACTTCTCCC GGCAAAAAAA AGATTCTCAC GCTTGACGGC
GGCGGTATTC GCGGTATGAT CACCATAGAA GTCCTCGGTA AAATTGAACA GCTGCTGCGA
AAACAACTCA ATAAAGGGCC TGATTTCGTC CTTGCAGACT ACTTTGATTT CGTGGCCGGA
ACCAGTACCG GCGCTATCAT CGCGACCTGC ATTTCACTCG GTATGCCGGT TGAAGACATA
AAAAGTTTTT ACACTAAAAA CGGTCGCGCC ATGTTCGATA AGGCGTTTCT GCTTAACCGA
TTGTTTTTCA ACAAGTACAA ACACGAAAAG CTTGCAAGGA AACTTCGGAA CACGTTTGGG
GCGAAAACGA CGCTCGGCAG TGATACACTG CGAACCGTGC TCATGATGGT GATGAGAAAC
GCGACAACGA ATTCGCCATG GCCGATCTCC AACAACCCGT TCGCCAAATA TAACGAGTCT
GTACGCCGTA ACACATTTCC TCATGACTGC AACCTCGATA TGCCTCTCTG GAAACTTGTC
CGCGCAAGCA CAGCAGCGCC AACCTATTTC CCCCCGGAGG TCATTAAAGT GGGATCAAAA
GAGTTTATCT TTGTCGATGG CGGTGTCACC ATGTACAACA ACCCTGCCTT CCAGGCATTC
CTGATGGCTA CGGTGGAGCC CTATAACATG AACTGGCAGG TCGGAGAAAA TAATCTGCTT
GTGGTCTCTG TTGGAACCGG CTATTGCGCC AATGCCAACA AAGACCTCAA GCCGTCCGAG
ATGAACATTC TGTACAACGC CTCCTCGATT CCTTCAGCGC TTATGTTCGC CGCATCGAAC
GAACAGGATT TCCTCTGCCG TGTTTTCGGA GACTGCAAGG CAGGTGACCT TATAGACAGG
GAGGTCAGAA CCATGATGGG CAAGCAAGGC CCCGTCTCCC CCAAGCTCTT TACCTATCTG
CGGTATGATG TTGAGTTGTC AAGGCAGGAG CTGAATGTAC TGTGCCTCAA GGATATTCTC
CCGGAAAATG TCCAGAAAAT GGATTCAGTC GACCATATGG AAGAACTGCA GAGGGTTGGA
GCAGCTGTTG CGAAAAAAAA CGTTGAAAGC AGACATTTCG AACGTTTCCT GTAA
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| Protein sequence | MSIAERITSP GKKKILTLDG GGIRGMITIE VLGKIEQLLR KQLNKGPDFV LADYFDFVAG
TSTGAIIATC ISLGMPVEDI KSFYTKNGRA MFDKAFLLNR LFFNKYKHEK LARKLRNTFG
AKTTLGSDTL RTVLMMVMRN ATTNSPWPIS NNPFAKYNES VRRNTFPHDC NLDMPLWKLV
RASTAAPTYF PPEVIKVGSK EFIFVDGGVT MYNNPAFQAF LMATVEPYNM NWQVGENNLL
VVSVGTGYCA NANKDLKPSE MNILYNASSI PSALMFAASN EQDFLCRVFG DCKAGDLIDR
EVRTMMGKQG PVSPKLFTYL RYDVELSRQE LNVLCLKDIL PENVQKMDSV DHMEELQRVG
AAVAKKNVES RHFERFL
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