Gene Cphamn1_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1348 
Symbol 
ID6375026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1464030 
End bp1464824 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content48% 
IMG OID642683845 
Producthypothetical protein 
Protein accessionYP_001959759 
Protein GI189500289 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGG TTGTTGAAAT CTCGACCTGG CAGCTGCTTC TTGGGCTGAT ATTTATCATT 
CTGGCCCAGG GAGCATCATT CGCATATCAT CTCGGACTGA ATCGGGATAT TACTGTCGGT
ACCATCAGGA CCTTTGCCCA GCTTTTTCTT ATGGGCTATG CGCTTACCCT TATTTTTCAA
CTGAACTCTG TCTGGTTCAC GCTGGGAATA TTTATCATTA TGGCGGTCTC CGCATCGTTT
ATTGTCAGGG GAAGGGTAAA AGAAAAGCAG ATCTCGTATA TGGTTCCGAC TTTTCTTACC
ATGTTCATCA GCTATTTTGT TACCGCGATT TTTGTTTCCG GTCTTATTGT GGGAGTAGAT
CCCTGGTGGG AACCGCGATA TTTTCTCCCG ATAGGCGGGA TGGTTATAGG TAATTCCATG
TCAGCACTTG CTATTGCGCT CGAACGTCTG TTCAAAGAGA TCCGCCAGCA GAAAGATCTT
ATTGAAACAC AGCTTTGTCT CGGGGCAAAC TACAGGGAGG CAAGTTCGGA AATGTTTAAA
AATGCTGTGA CGGCCGGTAT GATTCCGTCA ATCAACGCGA TGATGGGAGT AGGCCTTGTT
TTTATTCCCG GAATGATGTC CGGACAGATT CTCGCGGGCG CGGATCCACT TCAGGCAATT
CGCTATCAGA TAGTGATCAT GCTCATGCTG GTGGGGTCAA CAGCGACGAC GTCCATCATT
ACCATGCTCA TAGTCAGGAA ACGCTGTTTC GGCAGGGGAG AAGAACTGCT GCTGTCGACA
AGCGGACGGG AGTGA
 
Protein sequence
MNPVVEISTW QLLLGLIFII LAQGASFAYH LGLNRDITVG TIRTFAQLFL MGYALTLIFQ 
LNSVWFTLGI FIIMAVSASF IVRGRVKEKQ ISYMVPTFLT MFISYFVTAI FVSGLIVGVD
PWWEPRYFLP IGGMVIGNSM SALAIALERL FKEIRQQKDL IETQLCLGAN YREASSEMFK
NAVTAGMIPS INAMMGVGLV FIPGMMSGQI LAGADPLQAI RYQIVIMLML VGSTATTSII
TMLIVRKRCF GRGEELLLST SGRE