Gene Cphamn1_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1327 
Symbol 
ID6375005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1439143 
End bp1440543 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content49% 
IMG OID642683824 
Productargininosuccinate lyase 
Protein accessionYP_001959738 
Protein GI189500268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA ACAAAAGCAC CGGAAAAGAA CTCCTCTGGC AAAGCCGTTT CTCTGAACCG 
TTTGACCGGG AGGCGCTGCT GTTCTCATCT TCAGTTGATG TCGACAAGGT CTTGTACCAG
GAAGATATCA AAGGTTCGAT CGCTCATGTA ACCATGCTCT CGGAAGAGGC GATTATTCCT
GTGGAAGAGG CGAGACTTAT CATCGAGGGA CTTGAGGATA TCGAACAGGA GATCAGCTCA
GGAGCGCTTA TACCTGATTG GGAAGATGAA GATATACACA CTGTCATAGA AAACAGGCTG
AAAGAAAAGA TCGGACCCAT TGCAGGCAAG ATGCATTCAG GCAGAAGCCG GAACGACCAG
GTCGCCACTG ATACAAGACT TTACCTGAAA AAGGTGATCG GCGAACTGGG TGAGGCTCTT
GACGGTCTGA AAACACTGCT GGTCGAAAAG GCGGATATCT ACCGGAACAC GATTATTTTT
GGCTATACAC ATCTGCAGCG GGCACAGCCT GTCTCTGCAG GACACTACTA TCTGGCCTAC
TTCAATATGT TCCTGCGGGA CGGCGAAAGA CTCAAAGACC TCTTCAAGCG GGTCGACATC
TCTCCCCTCG GTGCCGCGGC TTTCGCAGGA AGCACACTAC CTATCAACGC GAAAAGAAGC
ATGGAACTGC TGGATTTCAG TGACCTTTTC CAGAACAGCA CTGATGCCGT CAGTGACCGT
GATATCATCA TTGAGTTCAT TTCAGCATGC TCGATCATCA TGATGCACCT TTCGAGGTTC
TGTGAGGACC TCATACTCTG GAGCAGCTCG GAGTTCAATT ATATAGAGAT AAGCGACGCC
TTCTCTACCG GTTCGTCGAT CATGCCCCAG AAAAAAAATG CGGACATTGC TGAACTAGTA
CGAGGAAAAA CAGGAAGAGT TTACGGTAAT CTCATGAGTA TTCTGACGAT CATGAAAAGC
CTCCCTCTCT CCTATAACAG GGACATGCAG GAGGACAAAC CGCCTTTATT TGATTCAGCA
GGATCGACGG TTTCAAGTGT AAGAATCTTC ACAAAAATGC TCGCGCATAC CAGACTGAAC
GAAAAAAGGC TGAAAACCCT TACCGGCGAA GACCTGAGCC TTGCAACGGA AATCGCCGAA
TATCTCGTAA GAAAAAATCT TCCTTTCCGC GAAGCACACA GGATAACCGG AAAGATCGTG
AGCCATGCGA TCGAAAAAAG AACCTCCCTG CCGAAGATTT CCCTGGAAGA GTACAGGGGT
TTTTGCGACC TCTTCAACGA AGACCTCTAC GACGCGCTGA CACCTGAAGC CAGCATCAAC
TCAAAACACT CTCACGGCAG CACCTCTTTT GCCTCGGTTG AACAACAGAT AACTATCGCC
AGAGGCAAAC TCAGGAAGTA A
 
Protein sequence
MDKNKSTGKE LLWQSRFSEP FDREALLFSS SVDVDKVLYQ EDIKGSIAHV TMLSEEAIIP 
VEEARLIIEG LEDIEQEISS GALIPDWEDE DIHTVIENRL KEKIGPIAGK MHSGRSRNDQ
VATDTRLYLK KVIGELGEAL DGLKTLLVEK ADIYRNTIIF GYTHLQRAQP VSAGHYYLAY
FNMFLRDGER LKDLFKRVDI SPLGAAAFAG STLPINAKRS MELLDFSDLF QNSTDAVSDR
DIIIEFISAC SIIMMHLSRF CEDLILWSSS EFNYIEISDA FSTGSSIMPQ KKNADIAELV
RGKTGRVYGN LMSILTIMKS LPLSYNRDMQ EDKPPLFDSA GSTVSSVRIF TKMLAHTRLN
EKRLKTLTGE DLSLATEIAE YLVRKNLPFR EAHRITGKIV SHAIEKRTSL PKISLEEYRG
FCDLFNEDLY DALTPEASIN SKHSHGSTSF ASVEQQITIA RGKLRK