Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1291 |
Symbol | |
ID | 6374968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1403707 |
End bp | 1405056 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683788 |
Product | signal recognition particle protein |
Protein accession | YP_001959703 |
Protein GI | 189500233 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0012852 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.892865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACA ATTTAAGCGA CAAGTTAGAG GCTTCTTTTA AAAAGCTTGC CGGACAGGCG ACGATCAATG AAGTGAATAT CGGCATCGCC ATGCGTGATA TCAAACGTGC TCTGTTAAGC GCTGACGTCA ACTATAAGGT CGCAAAGAAA TTCGTGGACG AAGTCAGGTC CAGGGCGTTG GGTCAGGATG TGGTCAAAAG TGTTTCGCCT GCCCAGATGA TCGTCAAGAT AGTCAGTGAT GAGCTGACCG AGATCATGGG TGGTGAGCAT AAGCCTTTGA ACCTCACAAC GAATAAACTG CCTTCTGTTG TTATGGTTGC CGGCTTGCAG GGTTCGGGCA AGACGACTTT TTGCGCGAAG CTGGCAAAGC GATTGAAGAA AAATGGTAAA CATCCATTGC TTGCCGCTGC CGATGTTTAT CGTCCCGCTG CGGTTGAGCA GTTGAAAACG CTGGGAGAGC AGATCGAGGT ACCGGTGTTT TCTCTCGAAG TCAAAGACGC CCTGAAAGTT GCGCTTGACG CGGTCGAGTC TGCGAGAAAT AATGGAAACG ATGTTGTTAT TGTTGATACA GCCGGACGCC TGCAGGTCGA TGAGGGCATG ATGGCGGAAG CAGAGGCGCT GAAAGATCAG TTGAAGCCGG AAGAACTGCT GTTCGTTGTT GATGCCATGA TCGGTCAGGA GGCAGTCAAT ACGGCAAAGG TGTTTAACGA GCGCCTTGAT TTTGACGGTG TTGTATTGAC CAAACTCGAT GGTGATGCGC GTGGTGGTTC GGCACTCTCT ATCAAGCAGG TTGTCGACAA GCCGATCAAG TTTATGAGTG TCGGCGAGAA AGTCGATGAT CTTGATCTGT TTTACCCTGA TCGTATGGCC CAGAGAATTC TCGGCATGGG CGATATTGTC GGTTTCGTTG AAAAAGCCCA GGAGACGCTC GATCTCGAGA AAACGCAAAA GATGCAGTCA CGGCTGCTGA AAAATGAATT TGATCTGGAT GATTTTTTTG AACAGCTTCA GCAATTGAAG AAAATGGGTT CGATACAGGG TCTTGTGGAA ATGGTTCCCG GACTGAACAA AATGATCCCC AAGCAGGATC TTGACGGTCT CGATTTCAAG CCTATTGAAG CAATCATATC CTCCATGACC AAAGCGGAGA GAAATGCCCC TGAAATTATT AACGGAAGCC GCAGACAGAG AATCGCCAAA GGAAGCGGAA CACGTGTTCA GGATGTGAAT ATGCTGCTTA AGCAGTTTAA AGAGATGAAA AAGATGATGG GTTCGGTGAC CAAGATGACA AATTCAGGCC GCAAGATTCT TCCACAGAAT CTTCCGCTTG AAAAACTTAT GAAACGATAA
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Protein sequence | MFDNLSDKLE ASFKKLAGQA TINEVNIGIA MRDIKRALLS ADVNYKVAKK FVDEVRSRAL GQDVVKSVSP AQMIVKIVSD ELTEIMGGEH KPLNLTTNKL PSVVMVAGLQ GSGKTTFCAK LAKRLKKNGK HPLLAAADVY RPAAVEQLKT LGEQIEVPVF SLEVKDALKV ALDAVESARN NGNDVVIVDT AGRLQVDEGM MAEAEALKDQ LKPEELLFVV DAMIGQEAVN TAKVFNERLD FDGVVLTKLD GDARGGSALS IKQVVDKPIK FMSVGEKVDD LDLFYPDRMA QRILGMGDIV GFVEKAQETL DLEKTQKMQS RLLKNEFDLD DFFEQLQQLK KMGSIQGLVE MVPGLNKMIP KQDLDGLDFK PIEAIISSMT KAERNAPEII NGSRRQRIAK GSGTRVQDVN MLLKQFKEMK KMMGSVTKMT NSGRKILPQN LPLEKLMKR
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