Gene Cphamn1_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1242 
Symbol 
ID6374919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1348179 
End bp1349042 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content50% 
IMG OID642683740 
Productglycosyl transferase family 2 
Protein accessionYP_001959655 
Protein GI189500185 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.012024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA GAGGCGAACC GTTGGTGACG GTTACCATTC CGATGTATAA CAATGAACGT 
TTCATCAGTC AGACCATTGA ATCGATTCTG TCGCAGACCT ATACTGATTT TGAACTGCTT
GTCTATGACG ACAACTCGAC CGATGCATCG TATGAGATAG CGAAATCGTT TGTCGATCCA
AGGATGAGGG TTGTCAGAAA CGATAAAAAT CTTGGCCCGG AAGGCAACTG GAACAAGGCG
ATAGAAGAGG TACGAGGAAA GTATGTCAAG CTTATCTGCG GGGATGATAT TCTCTATCCG
AAATGCCTTG AACGGCAGGT GGCGGTTTTT GAGAAAAAGC AGCATGCCGG AATAAGTCTT
GTCTGCAGTC AGAGGACGAT TATCGACCCG GAAGGCAAGC CGCTGATCAA GAAAATCAAT
CTGGTCGATA AAGGACGCCA TAAAGCATCA GAGGTCACCC GGAAGCTTAT CCGGATGGGT
ACGAACATTC TCGGCGAACC GGTCTGCGGG CTGTATCCTG CCGCTCTCCT TCCGTATACC
AGAGGATACA CGGCAAAGGT TCCCTATACC ATCGACCTCG AGTTCTGGAC GCAGCTTCTG
AGGCTGGGGG ATCTCTATAT GATAGACGAG CCGCTCTGCG CGTTCAGGAT TTCCGATGAG
TCATGGTCTT CGAGGATAGG TGATATGCGC TACCATCATT TTATCGAGTT CATGGAGCAG
ACCGCATCGG AGAAGAGCTT CGAGATCACC GATCTCGATA TGTTTATCGG AAAGATCAAT
TGCGCGGTGC ACTCCATGAC CAGCACCGTC GGCTTTAAAC TCTTTGCCGG AGCCGCGCAG
GAAGAGGGAG GGGGGGGAAT ATAG
 
Protein sequence
MKRRGEPLVT VTIPMYNNER FISQTIESIL SQTYTDFELL VYDDNSTDAS YEIAKSFVDP 
RMRVVRNDKN LGPEGNWNKA IEEVRGKYVK LICGDDILYP KCLERQVAVF EKKQHAGISL
VCSQRTIIDP EGKPLIKKIN LVDKGRHKAS EVTRKLIRMG TNILGEPVCG LYPAALLPYT
RGYTAKVPYT IDLEFWTQLL RLGDLYMIDE PLCAFRISDE SWSSRIGDMR YHHFIEFMEQ
TASEKSFEIT DLDMFIGKIN CAVHSMTSTV GFKLFAGAAQ EEGGGGI