Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1242 |
Symbol | |
ID | 6374919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1348179 |
End bp | 1349042 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683740 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001959655 |
Protein GI | 189500185 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.012024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA GAGGCGAACC GTTGGTGACG GTTACCATTC CGATGTATAA CAATGAACGT TTCATCAGTC AGACCATTGA ATCGATTCTG TCGCAGACCT ATACTGATTT TGAACTGCTT GTCTATGACG ACAACTCGAC CGATGCATCG TATGAGATAG CGAAATCGTT TGTCGATCCA AGGATGAGGG TTGTCAGAAA CGATAAAAAT CTTGGCCCGG AAGGCAACTG GAACAAGGCG ATAGAAGAGG TACGAGGAAA GTATGTCAAG CTTATCTGCG GGGATGATAT TCTCTATCCG AAATGCCTTG AACGGCAGGT GGCGGTTTTT GAGAAAAAGC AGCATGCCGG AATAAGTCTT GTCTGCAGTC AGAGGACGAT TATCGACCCG GAAGGCAAGC CGCTGATCAA GAAAATCAAT CTGGTCGATA AAGGACGCCA TAAAGCATCA GAGGTCACCC GGAAGCTTAT CCGGATGGGT ACGAACATTC TCGGCGAACC GGTCTGCGGG CTGTATCCTG CCGCTCTCCT TCCGTATACC AGAGGATACA CGGCAAAGGT TCCCTATACC ATCGACCTCG AGTTCTGGAC GCAGCTTCTG AGGCTGGGGG ATCTCTATAT GATAGACGAG CCGCTCTGCG CGTTCAGGAT TTCCGATGAG TCATGGTCTT CGAGGATAGG TGATATGCGC TACCATCATT TTATCGAGTT CATGGAGCAG ACCGCATCGG AGAAGAGCTT CGAGATCACC GATCTCGATA TGTTTATCGG AAAGATCAAT TGCGCGGTGC ACTCCATGAC CAGCACCGTC GGCTTTAAAC TCTTTGCCGG AGCCGCGCAG GAAGAGGGAG GGGGGGGAAT ATAG
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Protein sequence | MKRRGEPLVT VTIPMYNNER FISQTIESIL SQTYTDFELL VYDDNSTDAS YEIAKSFVDP RMRVVRNDKN LGPEGNWNKA IEEVRGKYVK LICGDDILYP KCLERQVAVF EKKQHAGISL VCSQRTIIDP EGKPLIKKIN LVDKGRHKAS EVTRKLIRMG TNILGEPVCG LYPAALLPYT RGYTAKVPYT IDLEFWTQLL RLGDLYMIDE PLCAFRISDE SWSSRIGDMR YHHFIEFMEQ TASEKSFEIT DLDMFIGKIN CAVHSMTSTV GFKLFAGAAQ EEGGGGI
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