Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1240 |
Symbol | |
ID | 6374917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1345527 |
End bp | 1346828 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683738 |
Product | hypothetical protein |
Protein accession | YP_001959653 |
Protein GI | 189500183 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00997974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0297929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAAAACG CTAAACATGA CAGACTCGCG ATCGAGCCCG GAGCGATTGT GAGGATCTAT CTTTCCGTGT CAGTCTTTAT CATCACTGCA GCAGCATTTC TCGGAGCAGC AGGGGCATGG ACAGGAAGTC TGTTTCTCGA TACGGTACAT CCCTATGTGT TTTTTACGGG ATTCGGCAAT CTGGCGATCA TAATCCTTAA CCGTTACCTG ATCTCCGCAA TCTATCCCGA GCTTGAGATC GATCCGGAAA AGCAGATCCG CGCTATCTAC GGGGTGCTGC TCTCTGTGTT GCTTGTTTTT GTCGCGGTAG CTATGGAGTG GCCGTTACTC AAGGCTGCAG TCGGGCTTTT TCTTATCATC ATTGTCTTAT CTGCCGCGAG GGAGATATTT TCGACACTTT CGATCGGGAA AATCTGGCAG GAGGTTTCTG TCCGGTACTA TATCTTTGAT GTGCTCTTTC TGCTTGTCGC CAATCTGGGG CTTTTTACTC TGGGGCTCAA GGAGACCTTT CCGGAATCAG GTGTTATACC ATTTTTTGTT ACCCAGTCAA CCTATTTTCT CGGTTCCTCC TTTCCTCTGA GCATAAGCGT CATGGGCTTT CTCTATGCAT ATGTATGGCG CCGTTCTTCA GGAAAAGAAT GGATCAGAAA GCTATTCAGT ATATGGTTCT ACATTTTCGT CGGAGGGGTG CTTGTTTTTC TTGTGGCGAT TCTGATGGGA AATTATTTGG GTATGATGCT TGTCAGTCAT ACGCTCATGC TGGGAGTTCT TGCTCTCCTT GTCGGCTTTG CCCGTTATCT GTACGGTTTT TTTGCCAGGC AATTTCATCA TCCCGCGCTC GCCTTTCTGC TTTCAGGGCT TGCAATGCTG CTTGCCGCAA GCGCATTCGG GATACTGAAT ATCTTCTATT TTGATCATTT CGGCGCAAGA CCTCCCATTC CCCCGGATAG AATGTGGATC TATCATTCGC ATACCCACGC AGCGCTTCTG GGATGGATAT CCCTTTCGTT TACGGGTATG ATCTACATTG TTGTCCCTGC AATCGCAAAG GCCAATTCTC TCGAACTGCT TCGTTCTGAA AAAGCTCTTT CGCAATTGCT GGATGAAAAA ACACTTTCAA GAGCGTTCCG GCAACTGACC ATCGCCGTGG TCTCGGCAAC TGCGATCCTT CTCGCGTTTT ATCTGCATAA CGATGTTTTA CTTGCCGTTG GAGGGGTGGT GTATGGACTT GCTGTATTCT ATTCAAGGGG TAATCTGGCA AAAGCATCTA AAAGTGAAAA CCGAAAAAAA GGGAACCTAT GA
|
Protein sequence | MQNAKHDRLA IEPGAIVRIY LSVSVFIITA AAFLGAAGAW TGSLFLDTVH PYVFFTGFGN LAIIILNRYL ISAIYPELEI DPEKQIRAIY GVLLSVLLVF VAVAMEWPLL KAAVGLFLII IVLSAAREIF STLSIGKIWQ EVSVRYYIFD VLFLLVANLG LFTLGLKETF PESGVIPFFV TQSTYFLGSS FPLSISVMGF LYAYVWRRSS GKEWIRKLFS IWFYIFVGGV LVFLVAILMG NYLGMMLVSH TLMLGVLALL VGFARYLYGF FARQFHHPAL AFLLSGLAML LAASAFGILN IFYFDHFGAR PPIPPDRMWI YHSHTHAALL GWISLSFTGM IYIVVPAIAK ANSLELLRSE KALSQLLDEK TLSRAFRQLT IAVVSATAIL LAFYLHNDVL LAVGGVVYGL AVFYSRGNLA KASKSENRKK GNL
|
| |