Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1041 |
Symbol | |
ID | 6374712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1122888 |
End bp | 1125002 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683542 |
Product | Prolyl oligopeptidase |
Protein accession | YP_001959463 |
Protein GI | 189499993 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1770] Protease II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.726536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATA CCGCTGAAGC TCCTGAAAAA CCGGTCACGG AAATCTATTG CGGAAAAAAA ATTGTCGATC GCTACCGCTA CATGGAAAAT CTGAAGGATC CTCTCGTCCT GCAGTGGTTC AAAACACAGG AGGAATCCGC CCGATCAGTC ATGGAGAATA TTCCCGGAAG AAAATCGCTG ATTGAAAAGA TGCAGGATTT CGACAGCAGA AGATCTTCAA AAGTCTATAA TCTTGTCATA ACTGATAACG ACCGCTACTT CTATCTGAAA CGAACACCAT CCGACGAAAC CGGAAAGCTC TACTACAGGG AGGGATATTC AGGTGATGAA AGATTGCTCC TTGATCCGTC GCAACTGTCG AAAAAAGGAA CAGGGAACTA TGTCGTCAGT AACATTTCTC CTGACGATGA CGGTTCGAAA GTTGCGATAT CCGTTGCAGC AGATGGCTCG GAGGATGATA TCGTGATGAT CATGAACGTA AAAACAGGAG CGCTCTATCC TGAGAAGATA GATCGTTGCC GGTTCGCTTC ACCCTCCTGG CTTCCTGACG GCACAGCGTT CCTCTACAAC CGTCTTAACA AAGGCATGCA GGGGGACATC GATATCCAGA AAAACAGCCG GGTCTACCTC CACATGGTCG GAACCGATCC GTCCACTGAC AGGGAAATCT TCTCCGGAGC CACCAATCCC GACATGAACA TTCGTCCTGA AGACATTCCA TTTGTCCATT ACGACAAGGA CAGCGCGCAT CTCTTCGCCT TTATACAGAA CGTGGACCGT CGACTTTTTG TCTATTACGC GCCGGTTTCA GAACTGACAG CCGACAGGAT ATCCTGGAAA AAACTATTCA CACCTGAGGA TAACATTCAC GACTTTTCTG TCACTGAAAC AGACCTGTAT CTGTATACTC CGGATAACGC GCCGAATTTC AAGGTTCTTA AGACCTCTCT TCTGCAACCG GACATCAGCA ATGCCGAAAC AGTGATCGCA GAACACCCCG ATGCTGTACT TACCTCGTTC ACTATCACCA GCAAGGGCAT TTTTTACACC CAATCGAAAA ACGGCGTGGA AGTTGAATTC TTCAGACTAC GTACCGGAAA GAATAAAGCG GAAAAAATCA AACTCCCCTT CAAGGCTGGA ACCCTGCACC TGACAGGCAA GGGATTCCGG TTTCCTGAAG CATGGGTGGT AATCTCCGGA TGGGGCAGTG ACTATAAACG ATACCGCTAT GACGAAAAAT CCGGTTCGTT TATCTACGAA ACACTCTCTT CCCCTGCTGA ATACCCGGAA TATGAGGATC TCATCGTCGA CGAAGTCATG GTACCGTCGC ATGACGGCGT CAAGGTACCT CTTTCGCTGA TTTACAAAAA AGGCCTGAAA AAAGACGGCA AAAATCCTGT GCTTTTTTAT GGGTACGGCG CTTATGGTAA ATCACTAAGG CCGTTCTTCA GTCCATCGTT TCTCCTCTGG ACCCATAAGG GAGGAATTCT GGCTGTCGCG CATGTCAGAG GGGGAGGCGA GCTGGGTAAT GCATGGCACA AAGCAGGAAT GAAATCGACC AAACCCAACA CCTGGAAAGA TCTGATCAGC TGCACGGAAT ATATTATCAA AAACAACTAC TCCACTCCGG ACCTTATCGC CATCAACAGT GCCAGCGCCG GAGGAATACT TGTCGGCAAG GCGATGACCG ACCGACCCGA CCTTTTCGCG GCGGTCATTC CGCAGGTTGG GGCCATGAAC CCCCTTCGCG GGGAAGAAAC ACCCAACGGC CCTGTTAACG CGCCGGAATT CGGGACGGTC AAAGACTCCC TCGAATGCCT CGCGCTGATT GAAATGGACC CCTATCTGAG CATTACAGAC GGTGTCCGTT ACCCTGCCGC TCTTGTCACG GCAGGCCTCA ATGATCCCAG AGTGATCGCC TGGCAGCCAG CCAAATTCGC AGCCCGCCTT CAGTCCGCGA CGGCGTCACA GAGACCGGTG CTGTTCTACC CGGATTTCCA GTCAGGTCAT GGCATAGGCG ACACCAAGAC CAGGCAGTTC GAATCACTTG CCGACGTCCT GAGCTTTGCC TTCTGGCAGA CCGGACACAA GGAATTCCAA CCTGAAAAGC AATAA
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Protein sequence | MQNTAEAPEK PVTEIYCGKK IVDRYRYMEN LKDPLVLQWF KTQEESARSV MENIPGRKSL IEKMQDFDSR RSSKVYNLVI TDNDRYFYLK RTPSDETGKL YYREGYSGDE RLLLDPSQLS KKGTGNYVVS NISPDDDGSK VAISVAADGS EDDIVMIMNV KTGALYPEKI DRCRFASPSW LPDGTAFLYN RLNKGMQGDI DIQKNSRVYL HMVGTDPSTD REIFSGATNP DMNIRPEDIP FVHYDKDSAH LFAFIQNVDR RLFVYYAPVS ELTADRISWK KLFTPEDNIH DFSVTETDLY LYTPDNAPNF KVLKTSLLQP DISNAETVIA EHPDAVLTSF TITSKGIFYT QSKNGVEVEF FRLRTGKNKA EKIKLPFKAG TLHLTGKGFR FPEAWVVISG WGSDYKRYRY DEKSGSFIYE TLSSPAEYPE YEDLIVDEVM VPSHDGVKVP LSLIYKKGLK KDGKNPVLFY GYGAYGKSLR PFFSPSFLLW THKGGILAVA HVRGGGELGN AWHKAGMKST KPNTWKDLIS CTEYIIKNNY STPDLIAINS ASAGGILVGK AMTDRPDLFA AVIPQVGAMN PLRGEETPNG PVNAPEFGTV KDSLECLALI EMDPYLSITD GVRYPAALVT AGLNDPRVIA WQPAKFAARL QSATASQRPV LFYPDFQSGH GIGDTKTRQF ESLADVLSFA FWQTGHKEFQ PEKQ
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