Gene Cphamn1_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1020 
Symbol 
ID6374689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1099107 
End bp1099613 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content48% 
IMG OID642683519 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001959442 
Protein GI189499972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.571347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG CAAAGAGGAC ACCGCTGGAT TTAATTGACA CTGTTTACAC GCTCGCGTAT 
TGGATGACCG GTTCCGAGGC GGCTACAAAT GAGCTTTTCC GCAGAACCTA CAACGCGGCG
GAGATTGATG CTTCTGAAAC CGAGTTATTG AAAGCATTCA GGGCGTGCTA TCTGAATTTT
TTCGCGCATG ACTCTTCACG CAACGTACCG GCATCGCCTT ACACGCCACG TAATCTTCCG
CTCTCTTCAA TATTCAAGAG GTATGCAGAT ATAAAATTAT CTGTGTTGTT ATCGGAGATT
TGCGAACTCA ACCATCGTGA TATAGCAACA ATAATCGGCA AGCCTGTCGG GACGATAAGG
CAATGGTTGT CGTGGGGTCG TAAGTCGCTG ATCAAAGATA CCGGAGAGCA TGTTCGGCAA
TATGGTGAAT CCGGTTTCGC GTCACCACGT GAAAAGACGG CCGGATTGGG CTTTTCCGCT
GATCTGGAAG AAGTTGACTA TCGATGA
 
Protein sequence
MIDAKRTPLD LIDTVYTLAY WMTGSEAATN ELFRRTYNAA EIDASETELL KAFRACYLNF 
FAHDSSRNVP ASPYTPRNLP LSSIFKRYAD IKLSVLLSEI CELNHRDIAT IIGKPVGTIR
QWLSWGRKSL IKDTGEHVRQ YGESGFASPR EKTAGLGFSA DLEEVDYR