Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1020 |
Symbol | |
ID | 6374689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1099107 |
End bp | 1099613 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683519 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001959442 |
Protein GI | 189499972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.571347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATG CAAAGAGGAC ACCGCTGGAT TTAATTGACA CTGTTTACAC GCTCGCGTAT TGGATGACCG GTTCCGAGGC GGCTACAAAT GAGCTTTTCC GCAGAACCTA CAACGCGGCG GAGATTGATG CTTCTGAAAC CGAGTTATTG AAAGCATTCA GGGCGTGCTA TCTGAATTTT TTCGCGCATG ACTCTTCACG CAACGTACCG GCATCGCCTT ACACGCCACG TAATCTTCCG CTCTCTTCAA TATTCAAGAG GTATGCAGAT ATAAAATTAT CTGTGTTGTT ATCGGAGATT TGCGAACTCA ACCATCGTGA TATAGCAACA ATAATCGGCA AGCCTGTCGG GACGATAAGG CAATGGTTGT CGTGGGGTCG TAAGTCGCTG ATCAAAGATA CCGGAGAGCA TGTTCGGCAA TATGGTGAAT CCGGTTTCGC GTCACCACGT GAAAAGACGG CCGGATTGGG CTTTTCCGCT GATCTGGAAG AAGTTGACTA TCGATGA
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Protein sequence | MIDAKRTPLD LIDTVYTLAY WMTGSEAATN ELFRRTYNAA EIDASETELL KAFRACYLNF FAHDSSRNVP ASPYTPRNLP LSSIFKRYAD IKLSVLLSEI CELNHRDIAT IIGKPVGTIR QWLSWGRKSL IKDTGEHVRQ YGESGFASPR EKTAGLGFSA DLEEVDYR
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