Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0993 |
Symbol | |
ID | 6374662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1067289 |
End bp | 1068164 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642683494 |
Product | hypothetical protein |
Protein accession | YP_001959417 |
Protein GI | 189499947 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000916347 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000889659 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACAAT TCTACATTAT TTTTCTGGTC TTCAGCCTCC TGGTGACCGC TGTTATGTTG TGGCCGGGAC TTCTCGTTAA TCCCGGAAAT CTTTCGGAAG GGCATCAGAA GCTTGAGGGC GGCTGTCTGA GCTGTCATAC GCCATTGTTG GGGACACCTT CGTCACAATG TGTTTCCTGT CACAGTGCAG AAGAAATCGG CCTGAAAGAC GCTTCGGGAA GAGAGCTGGT CGAGCCTGAT TCCGTCGCTG CCCTGCTGCA CAGGGAGCTC CAGGCCTCGG AATGCGTTGC CTGTCATACC GAACATGCCC TTCCGGGCAA AGGTCCGCTT CTTGCAGCTA TGGATCATAA TGTTCCGGCA ACTGAACTGC AAAAAAACTG TACGGTCTGT CACGAGCCTG ACCGTCCTGA GGATGCACTG CACGCCCGGG TGGAGACAAG CTGTAATGAG TGCCACGGAA CAAAGCGCTG GGAACCTGCG GACTTCGATC ACGAAAGCTG GCTGCGTGCC GACCTGAGCC GATCAGGATC CTGTGCACGC TGTCACGAAC CTGACCGTCC GGATGATACA ATGCACAGAG ATGCGAAAAA CAGCTGTAGC GATTGTCACA GTACGAAGGC GTGGGAACCG GCGGAATTCG ATCATGATCA ATGGTTCAGG TTTGACCGTA GTCATCCGGC TGACTGCAGT ACCTGTCATG ACAATCCGGC GGATTACAAG CGGTATACCT GTTACGGATG TCACGAGCAT TCGAAGCGAG GAGTGGCGGC TGAGCACAGG GAGGAAGGGA TTCGGGAGTT CAGCAACTGC GTCGAGTGTC ACAGGAGCAG CAATGAAGAT GAAGCTGAAC GGGCATGGCG AAAAATCCGT CGGTAG
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Protein sequence | MKQFYIIFLV FSLLVTAVML WPGLLVNPGN LSEGHQKLEG GCLSCHTPLL GTPSSQCVSC HSAEEIGLKD ASGRELVEPD SVAALLHREL QASECVACHT EHALPGKGPL LAAMDHNVPA TELQKNCTVC HEPDRPEDAL HARVETSCNE CHGTKRWEPA DFDHESWLRA DLSRSGSCAR CHEPDRPDDT MHRDAKNSCS DCHSTKAWEP AEFDHDQWFR FDRSHPADCS TCHDNPADYK RYTCYGCHEH SKRGVAAEHR EEGIREFSNC VECHRSSNED EAERAWRKIR R
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