Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0964 |
Symbol | |
ID | 6374631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1038529 |
End bp | 1039662 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683465 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001959389 |
Protein GI | 189499919 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTA CCGTTACCCA CAAAGATTCC GGAACAGCTT CGAGAAGCGG AATTCTCAGT ACCGATCATG GAGATATTCC AACGCCGGTC TTCATGCCTG TCGGTACACG GGCAAGCGTA AAATCGACAG AGCCTGAAGA ACTGAAAGCA CAGCAGGTTC ATATTATTCT TGCCAACACC TACCACCTCT ATCTCAAACC GGGAAATGAT ATCATGGGGA AGGCCGGCGG GATTCATGCG TTCATGAACT GGGACCGGCC GCTGCTCACC GACAGCGGCG GCTATCAGGT ATACTCTCTC TCCGAACTCC GAACCATCAG TGAAGAAGGC GTGCGTTTCA AGTCGCATCT CGACGGCTCC ATGCTGCAAT TCACCCCTGA GAACGTTATT GAAACCCAGC GGCTCATCGG CAGCGATATC ATGATGCCTC TCGACGAATG TCCTCCCTCG TCTGCCAAAA AAAACTATGT CAAAGAATCA GGCGATATGA CCGTTCGCTG GGCAGAACGG GCAAAAAAGC ATCTCTCGGC GACCAAACCA CACTACGGCC ACGCTCAGGC GCTCTTCGGC ATCACGCAGG GCGGAACCTA CGCAGACCTG CGCACACAGA TCAGCAGAGA GCTGGTCGAC CTTGATTTTG AAGGGTACTC CATCGGCGGT CTTGCGGTCG GGGAACCGGC CGAAAAAATG TACCGGATAC TCGAGCTTTC GCATACCATT CTGCCGGAAA ACAAACCGCG CTACCTGATG GGTGTCGGCA CCCCTGAAAA CATTCTCAAC GCCATAGAGC GGGGCGTCGA CATGTTTGAC TGTGTCATAC CGACCCGTGA AGCGCGAAAC GGACGTGTCT ACACCAGAAA CGGCTATATC AATTTGCGTT CCGCACGGTA TGCCGAGGAT TTCACTGCTA TCGACGAGGG GTTCGACAAC CATGTCTGCA GAAACTACTC GAGAGCCTAT ATCCGACACC TGCTCAATGT CGGTGAGCTC CTCGGCCTCA AGCTCTGTAC CTTGCATAAC ATCTCCTTTT TCATGTGGCT CACCCGAACC GCGAGAGAAC AGATTATCAA CGGCAGCTTC AGAGAATGGA AAGATGATTT TCTCAAGACC TTCAATGCCG GAAAACAGTC CTGA
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Protein sequence | MNFTVTHKDS GTASRSGILS TDHGDIPTPV FMPVGTRASV KSTEPEELKA QQVHIILANT YHLYLKPGND IMGKAGGIHA FMNWDRPLLT DSGGYQVYSL SELRTISEEG VRFKSHLDGS MLQFTPENVI ETQRLIGSDI MMPLDECPPS SAKKNYVKES GDMTVRWAER AKKHLSATKP HYGHAQALFG ITQGGTYADL RTQISRELVD LDFEGYSIGG LAVGEPAEKM YRILELSHTI LPENKPRYLM GVGTPENILN AIERGVDMFD CVIPTREARN GRVYTRNGYI NLRSARYAED FTAIDEGFDN HVCRNYSRAY IRHLLNVGEL LGLKLCTLHN ISFFMWLTRT AREQIINGSF REWKDDFLKT FNAGKQS
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