Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0890 |
Symbol | |
ID | 6374557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 962239 |
End bp | 963906 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683392 |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_001959316 |
Protein GI | 189499846 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0367824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTGT CGGTCATGCT GCATCTGCTT CGTTACAGGG AACTTGTGGT AGTACACTAC AGCGGCGTCC CCTGTGCCTT GCATCTACAG CATGCTCAAC AATCGCTCAA CGTAGGTTCG ACAATTATGC CTGACAAGAT CCCAACCATT GCAGAAGCCT GTATCACTAT CGATTCACAT CGGTCATGGA TCGGGTATGC TGCGTTGCAA CATGCGCTGG GATGTGAGGC TCCACTGAGA GAACGCTGTG CTGTTTCCTC CGGCCATGTC CACGGGAGCG TCCGGCTTGA CAAAGGCATT CGCCTCTACG ATCAGCGCTA CCGTCCCAAT AATGACGTTG CCGGGCATCT CTTTTTCTCG CTCAAACATG AGACTCTCGA TCTGCTTGTC CTGAAAGAGA TTCTTGTTTG TCTCGGCGGT GAAACCATTA CCGAAATTGT CCAAACGTAT CGACAGAAAC AATTGGCACG AAAGCTGTGG TTTCTCTATG AATGGTTGAC TGCAGAAAGA CTTCCCCTCG ATGATGCAGA AACGCGAATA CGTTACGTAC CGATCCTCGA TTCAACGCAT TATTTCACAG GTTCAAACAG GCCATCGGCC CGGCACCGGA TTATTGACAA CCTGCCGGGC AACCGTTCAT TCTGTCCTCT GATACACAAA ACAGCGGTTC TACAAAAATT CATCGCTCTG GACCTCTCAG ACAAGGTCAG AAAGGTCATG GGAAGAGCAA GTCGTGACGT CTGGAGACGG GCAGCAAGTT TCTTACTGCT TGCCGACAGC CGTGCATCGT TTGCCATCGA GGGTGAACGC CCGCCCAGAA ACCGAATCGA GCGATGGGCA CAGGTTATTC AAAAATCGGG AAACCGTCCG CTTTCGATGA CTGAAATCCT GAACATGCAT GGGGCACTCA TCCAGGATCA CCGTTTCGTC ACTGCAGGAT TTCGAACTGA AGGCGTATTC CTTGGCGAAC GGGACCGTAA CGGAGAACCG CAGCCCGAAT TCATCGGTGC CCGCCCACAG GATATAGAAT CCCTCGTGAA AGGACTGGTG GACAGTCATC GCATCATGGC GGAAGCTTCG ATTGACCCGG TCATCCACGC CGCTGCCATA GCGTTCGGCC TTGTCTTCAT CCATCCATTC GAAGACGGCA ACGGCCGCAT GCACCGTGCA CTGATCCATC AGATTCTCAC CGAACGAAGC TTTGCCCCGC CCGGAATAGT ATTTCCGGTC AGCGCGGTTA TACTTGAACG CATAGAGGAA TATCAGCGCA TCCTCCGCGA ATATAGTTCG CCCCTCATGC ACAGCATTCA ATGGCAACCG ACAGAAAAGG GAAATATCGA AGTGCTCAAC GACACAGCTG ATCTCTACCG CTACGGGAAT TACACGGCTA TCGCTGAATT CCTCTATCAC GCTGTCGAAC AAACTATCTC TGAACTTCTC CCAAAAGAAG TTCACTACCT GACATGTTAT GATAAAGCCC GGAAAGCAAT CGGAAACCGT ATTGATATGC CCGCCAACCA GATACGCAAC CTGATCATGT TCATCACCCA AAACGATATG AAACTTCCCT TGAGAAGACG CCAGAAGGAA TTTGCCGCTT TGAGCGATGA GGAAGTGTTG GCAATTGAAT CAGATGTCGC TCAGGCTTTT TCAGTGCAAG AGAAATAA
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Protein sequence | MGLSVMLHLL RYRELVVVHY SGVPCALHLQ HAQQSLNVGS TIMPDKIPTI AEACITIDSH RSWIGYAALQ HALGCEAPLR ERCAVSSGHV HGSVRLDKGI RLYDQRYRPN NDVAGHLFFS LKHETLDLLV LKEILVCLGG ETITEIVQTY RQKQLARKLW FLYEWLTAER LPLDDAETRI RYVPILDSTH YFTGSNRPSA RHRIIDNLPG NRSFCPLIHK TAVLQKFIAL DLSDKVRKVM GRASRDVWRR AASFLLLADS RASFAIEGER PPRNRIERWA QVIQKSGNRP LSMTEILNMH GALIQDHRFV TAGFRTEGVF LGERDRNGEP QPEFIGARPQ DIESLVKGLV DSHRIMAEAS IDPVIHAAAI AFGLVFIHPF EDGNGRMHRA LIHQILTERS FAPPGIVFPV SAVILERIEE YQRILREYSS PLMHSIQWQP TEKGNIEVLN DTADLYRYGN YTAIAEFLYH AVEQTISELL PKEVHYLTCY DKARKAIGNR IDMPANQIRN LIMFITQNDM KLPLRRRQKE FAALSDEEVL AIESDVAQAF SVQEK
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