Gene Cphamn1_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0772 
Symbol 
ID6374437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp825822 
End bp826661 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID642683278 
ProductIntegrase catalytic region 
Protein accessionYP_001959204 
Protein GI189499734 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.422542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA AAGAACATCA AAACCTCAGC ATGACACGGC AATGCGACCT GCTCTCGATT 
CACCGATCAG GGCTGTATTA CCAGTCAAAA AAAACGTCGA AGCTGAACCT TGAGCTCATG
CGGTTAATCG ATCAGCAGTA CCTGAAGAAA CCGTACTACG GCGTGTATCG CATGTGGCAA
TGGTTGGTCA GGGACAAGGG CTACAACATC AACATCAAGC GGGTCCGGCG GCTGCATCGT
CTTATGGGCA TGGAAGCCAT CGGGCCGAAG CCGAACACCT CCAGGCCAGC ACCAGGGCAC
AAGGTCTATC CGTATCTGCT TCGAGGCCTT GAGATCACGC ATAGTAGCCA TGTCTGGGCG
ACCGATATCA CGTATGTGCC AATGGCTCAA GGCTTCATGT ACCTGATGGC TGTCATCGAC
CTCAAAAGCC GCTATGTGCT GAACTGGTCG GTGTCAAATA CCATGGAAGC CGAGTGGTGC
GCTGAAGTCT TCAGGGAGAC CGTCAGGTTA CATGGCGCCC CGGAAATCCT GAACACCGAT
CAGGGCTCAC AGTTCACCAG CGAAGTCTTC ACCCGGGCAG TCATCGAAGA GGCCGGATCA
CAGCTCTCCA TGGACGGGAA AGGCCGGGCA ATCGACAACG TTTTCATCGA ACGGTTATGG
CGAAGTGTCA AGTATGAGTA CATTTACTAT CGTCCTCCCG TTGACGGGTT GGAACTCTAT
CAGGGGCTGA AAGAATGGTT CATCGATTAC AATACAGATC GGAGGCATAC TGCCCTGAAT
GATGAGTTCC CAGAGACGGT TTACAATCTT TACAAACTCA AGGCCCCGGA AGCAGCCTAA
 
Protein sequence
MVEKEHQNLS MTRQCDLLSI HRSGLYYQSK KTSKLNLELM RLIDQQYLKK PYYGVYRMWQ 
WLVRDKGYNI NIKRVRRLHR LMGMEAIGPK PNTSRPAPGH KVYPYLLRGL EITHSSHVWA
TDITYVPMAQ GFMYLMAVID LKSRYVLNWS VSNTMEAEWC AEVFRETVRL HGAPEILNTD
QGSQFTSEVF TRAVIEEAGS QLSMDGKGRA IDNVFIERLW RSVKYEYIYY RPPVDGLELY
QGLKEWFIDY NTDRRHTALN DEFPETVYNL YKLKAPEAA