Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0772 |
Symbol | |
ID | 6374437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 825822 |
End bp | 826661 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683278 |
Product | Integrase catalytic region |
Protein accession | YP_001959204 |
Protein GI | 189499734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.422542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGAGA AAGAACATCA AAACCTCAGC ATGACACGGC AATGCGACCT GCTCTCGATT CACCGATCAG GGCTGTATTA CCAGTCAAAA AAAACGTCGA AGCTGAACCT TGAGCTCATG CGGTTAATCG ATCAGCAGTA CCTGAAGAAA CCGTACTACG GCGTGTATCG CATGTGGCAA TGGTTGGTCA GGGACAAGGG CTACAACATC AACATCAAGC GGGTCCGGCG GCTGCATCGT CTTATGGGCA TGGAAGCCAT CGGGCCGAAG CCGAACACCT CCAGGCCAGC ACCAGGGCAC AAGGTCTATC CGTATCTGCT TCGAGGCCTT GAGATCACGC ATAGTAGCCA TGTCTGGGCG ACCGATATCA CGTATGTGCC AATGGCTCAA GGCTTCATGT ACCTGATGGC TGTCATCGAC CTCAAAAGCC GCTATGTGCT GAACTGGTCG GTGTCAAATA CCATGGAAGC CGAGTGGTGC GCTGAAGTCT TCAGGGAGAC CGTCAGGTTA CATGGCGCCC CGGAAATCCT GAACACCGAT CAGGGCTCAC AGTTCACCAG CGAAGTCTTC ACCCGGGCAG TCATCGAAGA GGCCGGATCA CAGCTCTCCA TGGACGGGAA AGGCCGGGCA ATCGACAACG TTTTCATCGA ACGGTTATGG CGAAGTGTCA AGTATGAGTA CATTTACTAT CGTCCTCCCG TTGACGGGTT GGAACTCTAT CAGGGGCTGA AAGAATGGTT CATCGATTAC AATACAGATC GGAGGCATAC TGCCCTGAAT GATGAGTTCC CAGAGACGGT TTACAATCTT TACAAACTCA AGGCCCCGGA AGCAGCCTAA
|
Protein sequence | MVEKEHQNLS MTRQCDLLSI HRSGLYYQSK KTSKLNLELM RLIDQQYLKK PYYGVYRMWQ WLVRDKGYNI NIKRVRRLHR LMGMEAIGPK PNTSRPAPGH KVYPYLLRGL EITHSSHVWA TDITYVPMAQ GFMYLMAVID LKSRYVLNWS VSNTMEAEWC AEVFRETVRL HGAPEILNTD QGSQFTSEVF TRAVIEEAGS QLSMDGKGRA IDNVFIERLW RSVKYEYIYY RPPVDGLELY QGLKEWFIDY NTDRRHTALN DEFPETVYNL YKLKAPEAA
|
| |