Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0748 |
Symbol | |
ID | 6374413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 793841 |
End bp | 794485 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683256 |
Product | type III restriction system methylase |
Protein accession | YP_001959182 |
Protein GI | 189499712 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.124073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTACA CCAAGTCCAA GCAACGTGTT GCAGACCACG GGGAGGTGTT CACCCCCGCC TGGATGGTAG AGGCGATGCT CGACCTGGTG AAGGGTGAGA CGGAGCGGAT CGATTCCCGG TTTCTGGAGC CCGCCTGCGG TAGCGGCAAT TTTCTCGTAA AGGTATTGCA GCGCAAGCTG ACCGCAGTGG AACTCAAGTA TGGCAAATCT GACTTTGAGC GACGGCATTA TGCACTGTAT GCCATTATGT GCATCTACGG CATCGAATTG CTGTCGGACA ATATTGCCGA ATGCCGCGCA ACCATGCTTG AGATTCTCGC CGAGTATCTG AATTTAGAGG AATCGGACGA CCTCTATCGA GCGGCACTCT ATGTCCTGTC ACAAAATCTT ATTTTTGGCG ACGCGCTCAA AATGCGCACC CACGACGACA AGGCGATTAC CTTTGCCGAG TGGGGCTATC TAGGTAAGGG AAAATTTCAG CGGCGCGACT TTCGTCTGGA CTCACTGACC CTTTCGTCAT CCTTCAGCGC GGAGGACTCG CTTTTTTCAA ATCTCGGCAG GCACGAGCTG TTCACGCCTT CGAAGACCTA TCCATCCATG ACGATCAGCG AACTGGCCGC ATCAGGCTCA AAGGAGAACG TATGA
|
Protein sequence | MNYTKSKQRV ADHGEVFTPA WMVEAMLDLV KGETERIDSR FLEPACGSGN FLVKVLQRKL TAVELKYGKS DFERRHYALY AIMCIYGIEL LSDNIAECRA TMLEILAEYL NLEESDDLYR AALYVLSQNL IFGDALKMRT HDDKAITFAE WGYLGKGKFQ RRDFRLDSLT LSSSFSAEDS LFSNLGRHEL FTPSKTYPSM TISELAASGS KENV
|
| |