Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0651 |
Symbol | |
ID | 6374315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 679882 |
End bp | 680784 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683163 |
Product | pentapeptide repeat protein |
Protein accession | YP_001959090 |
Protein GI | 189499620 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0569532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC AAGGCAGAAA ATTATTCCAC GGGACTGTTA TTGATGCCCG GAAGTTTATC GCAGGTGTCT TGTTTTTTTG TCTTGTTCTT TTGAGTGCCC GGGAAGGTTT CGCTTACGAC GCAGCACTTC TCACCAGGCT CAAACAGGGG GTTGCTGCAT GGAACCAGTT CCGGAAGGAT AACCCGAGCT ATGTGATCGA CCTTCGCATG GCGGACCTTC GCGACCATTC TCTTAAAGGG ATCAATCTCA GCAAGGCAAA CCTCAGCAAG GCAGATCTCT CCGATGCCAA CCTTGTAGAG GCGGATTTGA GCGGTTCAAT GCTTGTGGAG GCGAATTTAC GGGGGGCTAA CCTGAGCAGA GGAAAGGTTC GCGACGTTGA TCTAACGTCA GCAAACCTTT CCGATGGTTT TTTTATTGAA ACCGACTTCA CCAGGTCACA GATGGTGAGA TCAAAAATGC AGAGAGCGTT TCTGGGCAGA GCAACGCTCA CGGGAACCAA CCTCAGTTGG TCCAATCTCG AGAAAGTCAA TCTCGATAAT GCGGATCTGC AAAACGCCGT TCTTGTGGAT GTTGATATCA CCAGTTCCGA TCTTGTCGCA GCCAACTTTT CAGGAGCTGA TCTCAGAGAC GCAGACCTTT CAGAAGTCAA TCTTAGAAAT GCTGATCTCA CCGGGGCGGA TCTGAGAGGT GCCAGACTCA GTTTCAGTCA GAATATGACA GGCTCTACAC TGAACAACGC AATCCTGCAT TCAGCCAATC TCATAGGCAC AAATCTCAAT GGTGCCGATA TTGAGCAAGC AGATTTTTCT GGTGCGAAAA TTTCGACTAA AACCATTTTG CCCAGTGGGG TAAAAGGTAA TTCCGAATGG GCCAAAGCGA AGGGTGCGCT GTTTGTAAAA TAA
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Protein sequence | MKNQGRKLFH GTVIDARKFI AGVLFFCLVL LSAREGFAYD AALLTRLKQG VAAWNQFRKD NPSYVIDLRM ADLRDHSLKG INLSKANLSK ADLSDANLVE ADLSGSMLVE ANLRGANLSR GKVRDVDLTS ANLSDGFFIE TDFTRSQMVR SKMQRAFLGR ATLTGTNLSW SNLEKVNLDN ADLQNAVLVD VDITSSDLVA ANFSGADLRD ADLSEVNLRN ADLTGADLRG ARLSFSQNMT GSTLNNAILH SANLIGTNLN GADIEQADFS GAKISTKTIL PSGVKGNSEW AKAKGALFVK
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