| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0636 |
|---|
| Symbol | |
|---|
| ID | 6374300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 667846 |
|---|
| End bp | 668643 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642683148 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001959075 |
|---|
| Protein GI | 189499605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTCTC AACTCGATAA ATTTCATGAA AGTGCATCCG ACAAGGCCCG AAGGTGGTCT
TTTGGAGAAG ATTTTCTTGA TACGGAAAAC ATACGGGGAC TTACTTACGG TAATCTGCTG
CTTCGAAAGC AGAGCCATCT TTTTCTCAGC CATGGCGTGA TCGTGGCAGT CGGTCTTCTT
GCATGTTTCT GGCTGATCAG CGTCAACTGG GACAGATTGA CCGGCTGGAC CGGACTGTTT
CAGGATGAGC CGAAACAGGT TCAGTGCTAC ACATCGGTAA CCAGCGTCAC GCAGCTTCCT
CCGCCTCCTC CGATAGCAGC GCCTCCAGCT CCTCCGCCGG TTCAGAAGGC GGCACCTCCG
GTTGTCGAGG CGCCTTCAAA TGTCGGTAAA ATCAAAAAGG TTAAAAAAGA AGAGGCTCCT
CCGGAACAGA CTCTGGCAAC CCAGAAGGAG ATAAAGCAAG CCGCGCAACA GCAAAGTGGA
GCGGGTGCCG GAATAGCTGA CGGTCCTGTG TTTGTGCCTT GTGAAGTCAT GCCTGCGTTT
CTCAAGCAGA AAAAGCCACG GTATCCCGAG ATTGCGCGCC GCGCGGGTAT CGAAGGAAGG
GTGTTCGTGA GTGTGCTGAT ATCGGAAAGA GGTCAGCCGA TGAAGGCCAG GATTATGAAA
CGTGTGCCAT CCGATCAGAC AGTTTTCGAC GATGCTGCGG TTGAGTGCGT CATGACATCT
ACCTATACTC CCGGCATACA GAACGGGGCT CCTATAATGG TATGGCTGAC CGTGCCGATA
CGCTTTGACC TCCAATAA
|
|---|
| Protein sequence | MPSQLDKFHE SASDKARRWS FGEDFLDTEN IRGLTYGNLL LRKQSHLFLS HGVIVAVGLL
ACFWLISVNW DRLTGWTGLF QDEPKQVQCY TSVTSVTQLP PPPPIAAPPA PPPVQKAAPP
VVEAPSNVGK IKKVKKEEAP PEQTLATQKE IKQAAQQQSG AGAGIADGPV FVPCEVMPAF
LKQKKPRYPE IARRAGIEGR VFVSVLISER GQPMKARIMK RVPSDQTVFD DAAVECVMTS
TYTPGIQNGA PIMVWLTVPI RFDLQ
|
|---|
| |