Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0631 |
Symbol | |
ID | 6374295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 663574 |
End bp | 665466 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683143 |
Product | DNA primase |
Protein accession | YP_001959070 |
Protein GI | 189499600 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCCGA ATAATAAAAT AGATGAGATT CGGGAAAGTT GCGATATTGT CGATGTCATC TCGGATTATG TAAAACTCCA GCCCTCCGGC AGAAACTACA AGGCCCTTTC GCCGTTTACC AGTGAAAAAA CCCCTTCGTT TGTCGTCTCC CCGGATAAAC AGATCTACAA ATGCTTCTCC AGCGGAAAAG GAGGGAACGT GTTTACCTTC ATTATGGAGA TGGAAAAGCT CTCTTTCCCT GAATCGGTTG AACTTGTAGC CAAACGCTGT GGTGTAGATA TCAGCAAATA CCTGAAAAAC CAGGGATCTA TCGACAAAAC CGAACGCAGT GAACATGAAC CCCTTACCTG GGCAGCAAGG CTCTATAACC GACTGCTGAA TTCTGCAGGC GGACAAAAAG GGCTCGAATA TCTTGTAAAG AAGAGAGGGC TGTCACAGAA AACCATTACC TCTTTCGGCC TTGGTTACGC CCCTGAAGCG TGGGATTATC TTCTGAAACA TACCGGAAGT TCGGCTATTG CCCTCGAACG TTTCGTCAAA ACCGGTCTTA TCTACCATAA CGAAAAGAAA AACTCCCACT ACGACTATTT TCGACACAGA GTCATGTTCC CGATTTTCTC TGTCGGAGGT CAGGTTGTCG GTTTTGGAGG AAGAACGCTC AGCGATGATA AACAGACCCC GAAGTATATC AATTCACCAG AAAGCGCTGT TTTCAACAAA TCCAGGCTGC TCTACGGCCT CCATGCGGCC AAGGATATGA TCCGAAAACA GGGTTTTGCC ATTCTTGTAG AAGGGTATAT GGATGTGCTT GCCCTGCACC AGGCAGGTAT GATCAATACA GTAGCATCCT GCGGTACCTC CCTTACCAGG GAACAGGCAA AAATCCTCAG AAGATACACG GAAGAGATTC TCTTTATTTA CGACGGTGAC CAGGCGGGCA TGAAATCCAT GCTCTCCGGC ATCGATGTGC TCGTTGCAGA AGGCCTTACG CCATGGGTAG CCACCCTCCC GGCTGGAGAA GATCCGGACA GTCTGGTAAC AAGTAAAGGC CGGGAAGGGT TTCTGAAATT CATCGACAGC TCAAGGAAAT CATTCATCGA TTTCCAGATC ACGTTCCACC AAAAGGACGG ATCGTTTGAC CAGCCCGAGA AAAAATCCCG TGCGATCCGG GAAATCCTGA AAACCGTCAC CATGGTAACC GATACCGCGC GAAAGGAACT CTATCTACAG GATCTCGAAC AGAAAATAGG GATCAGCGTA GCGGTACTGA AGCGCATTAT CAGTGAAATA AAAACATCAA AACACTCCTC GAAACGATCA ACCCGTGATG ATACCGGAAA AAGCCCGGCT CAAAAAAAAG AAGCACTTTC AGTGCTTGAG AAAACCTTTA TCAAATCGCT TCTGGAAAGC ACGTGGTATG GCAATGAGGT ACTGGAATTC TCGGCTTCAC ATGAAACCCT CCTGAAGCTG TCAAACCCGG TTGCCGCTCA TATACTGCAA CACCTTATCA AACGGTATCG GGAGAATAAA GAGACTCCCG GTAGCTTCCT GGATATAACC AATGAAATAG GTTCTATGAG CAGCCCCGAA GCGCGTGACC TTGCCTCTGG GCTGCTCATA GAACAACCCG TCAGTGAACG GTGGCAGGCT TCATTCGACG AACAGCAGCA GAAAGCCAGG CGCTGCCTGA CCGCCTTTCT CGATTCCGTA AGAAGCCTTA TCCTGAACGA TTTTCGTGAA ACAAGAAAAC ATATAATCGA TCAACTTCGT ACGGTAACCG ACCTCGACAG GGAAAAAGCG CTCACCGAGA AACTCCAGCA GCTGCGCAAA GAAGAGATGA ACACAGCCAA AGAAGTCAAC GACATGATCA AGGCAATTCT ACAGAACAGG TAA
|
Protein sequence | MIPNNKIDEI RESCDIVDVI SDYVKLQPSG RNYKALSPFT SEKTPSFVVS PDKQIYKCFS SGKGGNVFTF IMEMEKLSFP ESVELVAKRC GVDISKYLKN QGSIDKTERS EHEPLTWAAR LYNRLLNSAG GQKGLEYLVK KRGLSQKTIT SFGLGYAPEA WDYLLKHTGS SAIALERFVK TGLIYHNEKK NSHYDYFRHR VMFPIFSVGG QVVGFGGRTL SDDKQTPKYI NSPESAVFNK SRLLYGLHAA KDMIRKQGFA ILVEGYMDVL ALHQAGMINT VASCGTSLTR EQAKILRRYT EEILFIYDGD QAGMKSMLSG IDVLVAEGLT PWVATLPAGE DPDSLVTSKG REGFLKFIDS SRKSFIDFQI TFHQKDGSFD QPEKKSRAIR EILKTVTMVT DTARKELYLQ DLEQKIGISV AVLKRIISEI KTSKHSSKRS TRDDTGKSPA QKKEALSVLE KTFIKSLLES TWYGNEVLEF SASHETLLKL SNPVAAHILQ HLIKRYRENK ETPGSFLDIT NEIGSMSSPE ARDLASGLLI EQPVSERWQA SFDEQQQKAR RCLTAFLDSV RSLILNDFRE TRKHIIDQLR TVTDLDREKA LTEKLQQLRK EEMNTAKEVN DMIKAILQNR
|
| |