Gene Cphamn1_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0496 
Symbol 
ID6374160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp517128 
End bp517634 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content46% 
IMG OID642683013 
ProductNusB antitermination factor 
Protein accessionYP_001958940 
Protein GI189499470 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT ATCGCCGTAG AATTCGGGAA AAAATCATAC AGGCCTTGTA CACGATCGAG 
TTAACAGGAG CCGACATGGA TTCAGCTTCC GACTGGCTTA TCACACCGCA AATAGCCGAG
GATTCCGGTG CTGTCCGGTT TTACAAACAG GTATTGCAGA GCATCCAGGA TCATAAGGAG
GAGATCGATG GCTATATAAC GAAACATACC TTCAACTGGG ACATGAGCCG AATAGCCATC
ATCGACAAAA ACATTTTGCG CATGGCCTTG GCGGAGCTGC TCTATTTCGA GGATATCCCG
CCAAAGGTTT CGATTAACGA AGCAATTGAA ATCGCGAAAA AATTCAACAG CACCGATAAA
AGCAGCAAGT TTGTCAACGG TATCCTTGAC GCCACGTACA ACGACCTCAA ATCATCGGGG
AAAATCAAAA AATGCGGGCG CGGACTCATA AATAACTCAA GCAGGAATAC TTCCCGGTCA
GAAGAAAAAC ACAGTACAGA AAAGTAG
 
Protein sequence
MKTYRRRIRE KIIQALYTIE LTGADMDSAS DWLITPQIAE DSGAVRFYKQ VLQSIQDHKE 
EIDGYITKHT FNWDMSRIAI IDKNILRMAL AELLYFEDIP PKVSINEAIE IAKKFNSTDK
SSKFVNGILD ATYNDLKSSG KIKKCGRGLI NNSSRNTSRS EEKHSTEK