Gene Cphamn1_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0473 
Symbol 
ID6374137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp495537 
End bp498527 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content53% 
IMG OID642682991 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001958918 
Protein GI189499448 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CAGTAACCGT TTTCCTGAAC AATGTATCAG TTCAGGCACC CGCCGGGGCT 
ACTATCCGTG AGGTGGCAGC AGCAAACGGG GTTCATATTC CGACGTTCTG CTATGATGAC
CGTTTACAGC CTTACGCTTC CTGTTTTCTC TGTGTTGTTG AGGTGGAAAA GGCAAGGGGT
CTTCTGCCCG CATGCAGCAC TGTTGTGGCG GAAGGCATGG TTATCCATAC GGATAGCGAA
AAAGTGATCA CCGCCCGGAA GACCGCTCTG GAACTTCTTC TTTCCGATCA TGCAGGGGAT
TGCGTCGCCC CGTGCGAAGC TACCTGTCCG GCGCATATCG ATATACAGGG CTATATAGCC
CACATTGCCA ACGGGAATCC GGAAGCCGCG GTCAGGCTTA TTAAAAAGTC AAACCCCCTG
CCGGTGGTAT GCGGCCGTAT CTGTCCTCAT CCCTGTGAAC TGCAATGCAG AAGAGGACTG
GTCGATGAAC CGGTTTCAAT CAATCCGCTC AAGAGATTTG CCGCGGAATA TGAGTTGGAG
CATGGCGCGT ATCTTCCGGA GACAGCTCCT GATACCGGTA AACGAGTGGC TGTTGTCGGT
GGAGGGCCTG CAGGTCTGAG TGCCGCGTAT TATCTTCGAC AGATGGGTCA CGCAGTGGTG
ATTTTCGAGG CACTGCCTGA ACTCGGAGGC ATGGTTCGTT ATGGTATACC GAGATTTCGC
CTGCCATGGG AGCTGCTTGA CAATGAGATT CAGTCGATCC TTGATCTTGG CGTGGAGGTA
CGGACGGGAA AGAAACTTGG AGAGGATTTT ACGATCGCAA GTCTGAAAAA GGAGGGCTTC
GACGCAGTAC TTCTTGCTGT GGGAGCTCAC CGGGCGAAGC CTATGGGCGT AAGCAGGGAA
GAGGCTCCAG GGGTTATCGG TGGCATTGAC TTTCTGCGTA AAGTGGTGCT GGGTGAAGAG
GTTGCTCTTG GTAATCAAGT AGCGGTTATC GGTGGCGGTG ATACCGCAAT GGACTGCGCG
AGGGTTGCAA GGCGCAAAGG AGCCGAAGTG ACGCTGCTTT ACCGCAGGAC CCAGGCGGAA
ATGCCGGCTC TTCCGATGGA ACAGGACGAG ACCATGGAAG AGGGGGTCGA GTTCATGTTT
CTCACTGCGC CCACTGAGGT GCTGGTCGAT GAAAACGGTC AGGTTTCTCA TCTCCGTGTC
ATCTCCATGA AACTTGGGGA CCCTGACGAG TCCGGACGGA GACGTCCTGT CCCGGTCGAG
GGATCTGAAG AGGATCTGCA GTTTGATATG GTTATCAGCG CAATCGGTCA GGATCCTGAC
ATGAGCTGCG TCGAGGATGA TCCTGAAAAG CCGGAACTTA CGCGCTGGAA CACGTTTGTA
TACGATGAAA AGACCAACGT CACTTCACAG AAGGGGGTTT TTGCCGCGGG AGATTGCGCT
TTCGGGCCTG ATACCGTGAT CAGGGCTGTT GGTGAGGGGC AGCGATCTGC CAAAGCTATT
GATCTCTACC TCTCCGGTGC CGATGTACAT CTGCAGAATG AGTATGCGAT TACCCGCGGA
CGGGTTCAGG ACCTGAAAAT GCAGGACTTC GCTTCGCGAT ACACCCATGA AAAAAGAGTT
CAGGATTCCG TATTGCCTGC TGAAGAACGG TTGAAAGACG GGGGATGGGT GCCGATCAAC
ATCGGTCTTG AAAAAATTCA GGCGATGGCT GAAGCCTCAC GTTGTATAGA ATGCGGTTGT
AATGCAAGGT TTGACTGTGA TCTGAGAACC TATGCTACCG AGTATGGTGC GGATGATGCG
CGATTCCGGG GCGATAAAAG AAAGTATGAC AATGACGAAC GACACCCGCT TATCAGGATA
GAGGGCGATA AATGTATCAC CTGCGGAAGT TGCGTGAGAA TCTGTACCGA AGTCAGGGGC
ATAGGGGCGC TCTGCTTTAT CAATCGCGGG TTTTCTACAA GAATCGGCCC CAATTTTGAT
GATCCTCTTC AGCTAACCGG GTGTGATGCC TGCGGCATGT GTATCGATGT CTGTCCTACA
GGAGCACTTG CACCGAATAC AGGAAAAGAA GCAGGTCCCT GGGAGGCTGT GGATGCCATG
ACGAGCTGCA GTTCATGCAG CAGAGGTTGC GGACTGATGG TCGCTACAGC TGAAGGAAGG
GTCGTCAGGG TTCAGAGTAT TGACGGAGAC CCGGTTAACA ATGCGGTTAT CTGTGCTGAA
GGGCGCTTCG GCTATCAGCT GCTTGACGAC AGAGGCAGTC ATGACGACCA GTCGTCAGTT
GAGGAATCCA AAGCGATGCT TGCATCCGCG GAAGAGCTCG CTGTTGTGGT ATCCCCGAGG
CTTACCATAG AACAGACCTA TGCCGCGGCA AGGCTTGCGA GGCGTTATAA TGGCAGGCTT
CTCTATATTT CGGGAGAAGA GGGCGCGTCA GAAAAACCGG ATTCCGTGCG ATACGCCAAA
ATATCCGGGG AAGCAAATAC CGCGCTTCTG GATCGTCTGC ATGCCGGCGG TATCTCGATT
GTAGAAGAAC TGAAAGCCGA TACGGTAGTT CTTGTGGGTG CACAGATTCC ATCATGCAAC
GGGCAGAAAA TCATTGCCAT CAATCCTGCG AAAGGCAATG AGGAGTGCTA TTTTGTCATG
GCTGACCCAT TACAGACTGA AGGTATGACG CTCAACCGGG ACGGCAATCT CTGTATGGTC
CATGCGGTAG TTCCAAAACC GGAGGAGGTG CCTGATTGTC ATGCACTGCT GGCGGAACTG
GCAGGAGAGG ATTCATTGAA AGAGCTTGAA TCGCTCCGCA ATGCCCTGGC CGACGAGATT
GAGGAGCTGT CGGTGATACG AAATCCCGAT AGTGACAAAC GGTTGTTCCA CTCCGGTCTT
GAGCCTGTAC TGACAGCAGT CTCGCCCGAT ACCCGTGAAA GAGCCTTTGC CGCGCACTTG
AAAGCTATCG GGATGTACGA ACCGAGGTGT GCCTGTGCAT GTGGCGATTA A
 
Protein sequence
MSDTVTVFLN NVSVQAPAGA TIREVAAANG VHIPTFCYDD RLQPYASCFL CVVEVEKARG 
LLPACSTVVA EGMVIHTDSE KVITARKTAL ELLLSDHAGD CVAPCEATCP AHIDIQGYIA
HIANGNPEAA VRLIKKSNPL PVVCGRICPH PCELQCRRGL VDEPVSINPL KRFAAEYELE
HGAYLPETAP DTGKRVAVVG GGPAGLSAAY YLRQMGHAVV IFEALPELGG MVRYGIPRFR
LPWELLDNEI QSILDLGVEV RTGKKLGEDF TIASLKKEGF DAVLLAVGAH RAKPMGVSRE
EAPGVIGGID FLRKVVLGEE VALGNQVAVI GGGDTAMDCA RVARRKGAEV TLLYRRTQAE
MPALPMEQDE TMEEGVEFMF LTAPTEVLVD ENGQVSHLRV ISMKLGDPDE SGRRRPVPVE
GSEEDLQFDM VISAIGQDPD MSCVEDDPEK PELTRWNTFV YDEKTNVTSQ KGVFAAGDCA
FGPDTVIRAV GEGQRSAKAI DLYLSGADVH LQNEYAITRG RVQDLKMQDF ASRYTHEKRV
QDSVLPAEER LKDGGWVPIN IGLEKIQAMA EASRCIECGC NARFDCDLRT YATEYGADDA
RFRGDKRKYD NDERHPLIRI EGDKCITCGS CVRICTEVRG IGALCFINRG FSTRIGPNFD
DPLQLTGCDA CGMCIDVCPT GALAPNTGKE AGPWEAVDAM TSCSSCSRGC GLMVATAEGR
VVRVQSIDGD PVNNAVICAE GRFGYQLLDD RGSHDDQSSV EESKAMLASA EELAVVVSPR
LTIEQTYAAA RLARRYNGRL LYISGEEGAS EKPDSVRYAK ISGEANTALL DRLHAGGISI
VEELKADTVV LVGAQIPSCN GQKIIAINPA KGNEECYFVM ADPLQTEGMT LNRDGNLCMV
HAVVPKPEEV PDCHALLAEL AGEDSLKELE SLRNALADEI EELSVIRNPD SDKRLFHSGL
EPVLTAVSPD TRERAFAAHL KAIGMYEPRC ACACGD