Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0472 |
Symbol | |
ID | 6374136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 493696 |
End bp | 495480 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682990 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001958917 |
Protein GI | 189499447 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.524488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA AGCCATCGAA GCCGTTAGAG ATAATTGTTG GTGAGGGCAC ATGCGGTATA GCGGCAGGGT CGAAAGATGT TATAGATATA TTCACTGAAC TTGCTCCTGA AGCGGCAATA AAAAGTGTCG GATGTGCAGG AATGTGTCAC GATGAAGTTA TGGTTGAGAT TATCGACGAG AAGAGAGGCG CCTGTCTCTA CAGGAAAGTC GATAAGAAAA ACATTCCTGA TCTTCTGAGT TTTCACAGGG GTGAAGGAAA GGTGCGGCAG GACCTGTTGA TCCGCTCTTC CATGCCGTCA GTCGGGGCTG ATTATCTTGA CCGCCAGACA AGGATAGCCT TGCGCAATAT CGGGCAGGTC GACCCTCAAT CTCTGGATGC ATACAGAGAG AGGGGAGGCT ACCGTTCGAT AGAAAAAATT ATCACGGAGG GGATCAAGCC TGAACAGGTA ATCGAGGAGG TACGAGTATC CGGTTTGCGA GGCCGTGGAG GAGCAGGTTT TCCGACAGCG GTTAAATGGG GATTCGCCCG TTCCGCGAAG GGTGAAAAGA AATATCTGAT CTGTAATGGT GATGAGGGTG ATCCGGGGGC TTTCATGGAT CGTTCTCTGC TGGAAGGCGA TCCGCATAAT GCCCTTGAGG GCATGCTTAT AGCTGCCTAT GCGATCGGAG CCTCTTCCGG GTACGCCTAT ATCCGGGCGG AATATCCTCT GGCTGTTGAG CATTTCAGAA AGGCTATAGA TGATGCAAGA AAGGCAGGGC TTCTCGGTAA CAACATACTT GGAAGTTCAT TTGATTTTGA CGTTACCATT AAACAGGGCG CAGGAGCTTT CGTCTGTGGT GAAGAGACCG CGCTGATCGC ATCTATCGAG GGTGAACGCG GGATGCCGCG TATTCGTCCG CCTTTTCCTG CGGTCAAGGG GCTTTTCGGG AAACCGACGA TTATCAACAA TGTCGAGTCG CTTGCCAACC TTCCGTGGAT CATTGAGCAT GGCGGTGCAG CTTACGCGGA AATCGGGACC GAGAAGAGCA AGGGGACGAA AGTATTTGCT CTTGCAGGAC CTATAAAGCG TGGCGGCCTT GTCGAAGTTC CTATGGGGAC GACGGTTCGG GAAGTTCTTT ACGATATCGG GGGAGGTTCA TCTGCCGGCA GGCCGATCAA GGCCGTGCAG CTTGGCGGCC CGAGCGGAGG ATGTATTCCG GAATCACTTT TCGATACACC TATCGAATAT GAAGCGCTCA ATGCAACAGG TGCTATCATG GGTTCGGGTG GTATGGTTGT CATGGACACC AAATCATGTA TGGTTGATAT TGCCCGATAT TTTCTCGAGT TCACCCAGAT CGAATCCTGC GGCAAGTGTA CCTTCTGCAG GATTGGTACT CTTCGTATGA AAGAGCTGCT GACCAGGATC TGCGATGGTC AGGGAACGAT GGATGACATC GATACGTTGG AAGATATTGC TCATCAGGTG AGATCATCCA GCCTTTGCGG ATTGGGTCAG ACCGCCCCCA ATCCGGTACT GACGACACTG AAATATTTCA GAGATGAATA TGTCGCTCAT GTTGAGGAGA AACGGTGCCC GGCAGGTGTC TGTAAAGGGC TTATCACCCA TACCATTATG CAGGATACCT GTACAGGTTG TTCAATCTGT GAACGGTACT GTCCGGTTGA CGCGATTACC GGAGTGATCA AAAAGCCCGA AAGCTGGGTG ATTGACCACG ACCTCTGTGT TAATTGTGGT ATGTGTGTTG AAGTTTGTAA TTCTGATGCT ATCAGCGTTG CATAA
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Protein sequence | MNQKPSKPLE IIVGEGTCGI AAGSKDVIDI FTELAPEAAI KSVGCAGMCH DEVMVEIIDE KRGACLYRKV DKKNIPDLLS FHRGEGKVRQ DLLIRSSMPS VGADYLDRQT RIALRNIGQV DPQSLDAYRE RGGYRSIEKI ITEGIKPEQV IEEVRVSGLR GRGGAGFPTA VKWGFARSAK GEKKYLICNG DEGDPGAFMD RSLLEGDPHN ALEGMLIAAY AIGASSGYAY IRAEYPLAVE HFRKAIDDAR KAGLLGNNIL GSSFDFDVTI KQGAGAFVCG EETALIASIE GERGMPRIRP PFPAVKGLFG KPTIINNVES LANLPWIIEH GGAAYAEIGT EKSKGTKVFA LAGPIKRGGL VEVPMGTTVR EVLYDIGGGS SAGRPIKAVQ LGGPSGGCIP ESLFDTPIEY EALNATGAIM GSGGMVVMDT KSCMVDIARY FLEFTQIESC GKCTFCRIGT LRMKELLTRI CDGQGTMDDI DTLEDIAHQV RSSSLCGLGQ TAPNPVLTTL KYFRDEYVAH VEEKRCPAGV CKGLITHTIM QDTCTGCSIC ERYCPVDAIT GVIKKPESWV IDHDLCVNCG MCVEVCNSDA ISVA
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