Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0419 |
Symbol | |
ID | 6374081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 441823 |
End bp | 443649 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642682936 |
Product | ABC transporter-related protein |
Protein accession | YP_001958865 |
Protein GI | 189499395 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0718918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCG GCAAAGAACA ATCAAAAGGG TTTACACCGC AGAAAGACGA CCTGCTTTCT TCAGGGAAAA AAGGGCCGGC TGACCGTTAT ATCATCTTAC GCCTGCTGAG CTATGTCAAA CCCTATAAAG GCCTGCTCGC TTCAGCCATA GCGATAACCC TTGCCGGATC GGTTCTGGGG CCACTCAGGC CCTATATGAC CAAGCTGGCT ATCGACGATT ATATCGCAAA GGGAAACATC AAAGGTCTTG CGCTGATCAG CCTCATCCTG CTTTTCATCA TACTCCTCGA CGGCTTAAAA CAGTACGCCG CGACCTACCT CACACAGCTC CTCGGTCAGA AAGCGGTGCT GAATCTGAGA ATGGATGTTT TCCGGCACCT GCAGAAACTT TCCGTTTCGT TTTACGACCG TAATCCGGCT GGCCGGCTTA TCACCAGAGC GACCAACGAT GTTGAAGCGC TCAATGAAAT GCTCTCAAGC GGTATCGTTA CAATTATCGG GGACATCATG CAGCTCCTGT TTATCGTTAT TCTCATGTTC ATGATAGACA CGGAACTGAC ACTGATCGTT CTGAGCATTC TTCCGTTTAT GATCTATGCT ACCATGTCTT TTAAAAGCAG GGTTCGCAAG GCTTTTCAGG ACGTCAGAGC TCACCTGGCG AAGCTTAACT CCTTTTTTCA GGAGCATATA TCAGGCATGA GCATCGTTCA GCTGTTTGAC AGGGGTGATA AAGAATATGA AAAACATGTC GCTATAAACA GAGAATACAG GGATGCAAAT ATTAAAACGG TTTTTTATTT CTCGGTATAC TACCCGCTTA TTGAACTGCT CAGCTCGACA GCGGCTGGTC TCGTCATCTG GTACAGCGGT CTGCGGATGC TTGAGGGGGA TCTTACACTC GGCATCGTTG TCTCGTTCGT ACAGTACATC TGGCTGTTTT TCCGTCCCTT GCAACACCTG TCCGACCGCT TCAATATTCT CCAGACCGCT CTTGCGAGTT CAGACAGAAT TTTCAGGCTT CTGGATGAAA AAGATATCGT CAAGGAACCC GAAAACCCTG TAAATCCAGG TTCTTTCAGG GATGAAATCG CATTCACCAA TGTCTGGTCG GCCTACAGCG CCGACAACTG GATACTCAAA GACATCTCAT TCAGCGTCAA ACGAGGAGAA AAAATTGCGA TCGTAGGGGC AACGGGAAGC GGTAAAACAA CCATCATCAA TCTCCTTTCA AAACTCTACA CCTATCAAAA AGGATCGGTA ACGCTCGATG GAGCAGAACT GTCAAGGATT CCTGAACGGA CACTCCGAAA GATTGTCGGT GTTGTCATGC AGGATGTCTT TCTTTTTTCC GGAACAATAA AAGAGAATCT TTCATTTGGA AAGCCGGATG TATCCGATGA AGAGATATAC CATGCCGTCA AGACCGTTGG TGCCGAACGT TTCATTGAAA AACTTCCGGA AGGCTATAAC TATCGGGTCA ATGAAAACGG TTCCGGCCTT TCGGCAGGTC AGAAGCAGCT CATTGCTTTT GTCCGCGCTC TTCTTTACAA CCCTGAGATA CTTGTCCTTG ACGAAGCCAC AAGTTCGGTC GACACAGAGA CTGAACAGCT CATTGAAACG GCGACCGCGA ACCTCATGGA AAACCGTACA TCAATTATCA TCGCGCACCG CCTTTCGACC GTGCAACATG CGGACAGAAT CATTGTCATG CACAAAGGCA CCATAAAGGA GAGCGGCTCC CATCAGGAAC TTCTTGCCCA GAAAGGCCTC TACTACAAAC TGTATCTCCT GCAGCACCCG GAGAAAATGC GCCTGCAGAC GGGGTAA
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Protein sequence | MSSGKEQSKG FTPQKDDLLS SGKKGPADRY IILRLLSYVK PYKGLLASAI AITLAGSVLG PLRPYMTKLA IDDYIAKGNI KGLALISLIL LFIILLDGLK QYAATYLTQL LGQKAVLNLR MDVFRHLQKL SVSFYDRNPA GRLITRATND VEALNEMLSS GIVTIIGDIM QLLFIVILMF MIDTELTLIV LSILPFMIYA TMSFKSRVRK AFQDVRAHLA KLNSFFQEHI SGMSIVQLFD RGDKEYEKHV AINREYRDAN IKTVFYFSVY YPLIELLSST AAGLVIWYSG LRMLEGDLTL GIVVSFVQYI WLFFRPLQHL SDRFNILQTA LASSDRIFRL LDEKDIVKEP ENPVNPGSFR DEIAFTNVWS AYSADNWILK DISFSVKRGE KIAIVGATGS GKTTIINLLS KLYTYQKGSV TLDGAELSRI PERTLRKIVG VVMQDVFLFS GTIKENLSFG KPDVSDEEIY HAVKTVGAER FIEKLPEGYN YRVNENGSGL SAGQKQLIAF VRALLYNPEI LVLDEATSSV DTETEQLIET ATANLMENRT SIIIAHRLST VQHADRIIVM HKGTIKESGS HQELLAQKGL YYKLYLLQHP EKMRLQTG
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