| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0417 |
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| Symbol | |
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| ID | 6374079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 439098 |
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| End bp | 440171 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642682934 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_001958863 |
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| Protein GI | 189499393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.059028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAT CAAAAACAAT CACGGTAAAC CGTAAGCAGA GCCACGTCGA GACATGCCTG
AAAAGAAATG TCTGTTTCGA CACAAAAACC ACAGGCTTTG AGCGATATGA ATTCACCCAT
AATGCCGCCC CTGAAATAAA CCATAGTGAC ATAGACCTTG CCACAAGCTT TCTGGGTCAC
CGGATTTCCT ATCCGTTCAT GATCTCTTCG ATGACAGGAG GTTATGAGCA AGCTGAAAAT
CTGAATCGCA TTCTTGCTCA AACCGCTGAA AAGCTTGGTA TTCCTCTCGG AGTGGGAAGC
ATGCGCCAGG CGCTTGAAAA TGCATCCTTC AGAGAGAGCT TCAGTGTTGT ACGCCAATCA
GCTCCTTCTG TTCCTGTTCT GGCAAATATC GGCGCCCCTG AGATTGCACA AGGCCTGACA
AAAAAAGAGC TCGACACCCT GATCGACATT GTGCGTGCTG ACGCCCTCAT TGTCCATCTG
AACCCTGCAC AGGAGCTGTT TCAGCCCGAA GGCAATACCC GCTTCAAAAA CTTTCTCACA
CAACTGAAAA AGATCACGGA AACCCTGAAG GTTCCGGTCA TCGTTAAAGA GGTCGGTTGC
GGTATATCTC CTGAAACAGC GAAAAACCTT GTTGAAAAAG GCGTTACGAT CATCGACATT
GCCGGAGCAG GAGGCATCAG TTGGCAGAAG GTTGAAGAAG AGCGCTACCT GCAGCAATTT
CAGCATGAAA ACCGTTTCTC TCCTTCCGCG CTTGAAGAAC TGCTCAACTG GGGTATCCCG
ACCGCTCGAA GCCTTACGGG CGTTGCCGCA CTTAAATCGA ACAATACGCA CTACCGGCAC
ATTCAAATCA TAGCGTCAGG AGGCATCTCG AACGGTGTAG ATATTGCCAA GGCGATCGCT
CTCGGAGCAG ATCTCTGTGC TTCAGCGGGC CAGATGCTCA AGGCATTGCA TGAACAGCGC
CTTGAAGAAA CGATTCTTAC ATGGATGAAC GATCTCAAGG CTGTGATGTT TCTCACAGGA
ACAAAAGATA TAAGACAGTT GCAACAAACC AGCATTTCAT TAAAACAAGG ATAG
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| Protein sequence | MNASKTITVN RKQSHVETCL KRNVCFDTKT TGFERYEFTH NAAPEINHSD IDLATSFLGH
RISYPFMISS MTGGYEQAEN LNRILAQTAE KLGIPLGVGS MRQALENASF RESFSVVRQS
APSVPVLANI GAPEIAQGLT KKELDTLIDI VRADALIVHL NPAQELFQPE GNTRFKNFLT
QLKKITETLK VPVIVKEVGC GISPETAKNL VEKGVTIIDI AGAGGISWQK VEEERYLQQF
QHENRFSPSA LEELLNWGIP TARSLTGVAA LKSNNTHYRH IQIIASGGIS NGVDIAKAIA
LGADLCASAG QMLKALHEQR LEETILTWMN DLKAVMFLTG TKDIRQLQQT SISLKQG
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