Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0402 |
Symbol | |
ID | 6374064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 426304 |
End bp | 429039 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642682919 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001958848 |
Protein GI | 189499378 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000176778 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.341297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCTG AGGGAAAGGA GATGAGATAT CGTATTAGTG ATATTGCCAG AGAACTGCAG GTCAGTCCTC AGGAGGTACT GCATTTTGTC AAAGAGGCAG GCGGAAAGGT TGCCTCGACA TCTTCTATGG TCAAGGGGCC TATGCGTGAC TTGATCCTGG ATCAGTTCAG TGATGAGAAA AAACTTGTGG ATGAAACCCG CAAGATTCGT GAGGAAAAAC AGTTGCGCTT GTCACGCCTT GAGGAGCAGT CCAGAAAGAC CTATGAGAAG GAGCAACAGC TGAAAGATAC TATCAGCGGC CGTCCTGAGA GAGCGGCAGC GAAACCCAGA ACAGAGGTTC CGTCTGAATC GGTTGAGCCT GAACCGGTAA AGGAGATGCC GGAGACAGTT GCGGAACCCG AGGTTACCGG GGTGGTTTCA GAGCCTGATG AAAACGTTGC GGCTGTAGCA GAAGAGGTCA AGTCTCCGGT TGAGGAAACG AGTGAGACAG TGGCTGAAAA AAATGACGTT GAAGGGCAGG TCAGTTATGA GGTTCCGCAG AAAATCGGCG GGCTTACAGT TTTCGGTACA CTTGATGTAC AGAGCTCTCT GGGAATGGGC GGCGAGGCCG ACAAGAAGAA ACAGCGTAAA AAACGTTTCA AGGAACAGGC TGATGAGCTG AAAGATGAGT TTGATATTAA GGCCAAGGAA GGTGGTAAGG AGAGAGAAGC GGGCGGGGAA TCCAGGAAAC CGGTGAAAAA GGGTTCGGAA GAAACCAAAA AGACAACGGT AGAGTCAACG TCGGCCAAGA AGAAAAAAGG CAAGAAGAAA AAGAAGCCGG AGGTAGACGA AAAGACTATC GAAAAGAACA TCCGCAGTAC CATTTCAGGG ATGGATGACA CCAGTGGAAG CGGTAGTTCG AGGCAGAAGT TTCGTAAGAT GCGCAAGATA GAGCGTGAAA AAGAGCTTGA AGAAGCAGAG GCGATCAAGG AAGCGGAGCG CAGTATTATC AGAGTTACCG AGTTTGCTAC AGCTCATGAA CTTGCTGATC TTATGGGCAT CCTTCCCAAG GAGATTATTC AGCATTGCTT CACGATGGGA AAATTTGTTA CCATCAATCA GCGTCTCGAC AAGGAGACAA TAGAGCTTGT CGCAATGGAG TTCGGTTTTG ATGCCGAATT CGTATCGGAG GTTGAGGCGA CTGAGGTTAC GGAAATAGAG GATGAGGAAG AAGAGCTGGA GATCAGACCT CCGGTGGTCA CTATCATGGG GCATGTGGAT CATGGCAAAA CCTCTCTGCT TGACTACATT CGCAGCAGTA ACGTCGTCGC CGGTGAGTCA GGAGGTATTA CTCAGCATAT AGGCGCCTAC GAAGTATCAC TTGACGGTGA TCGTAAAATC ACCTTTCTCG ATACACCCGG TCACGAAGCT TTCACTGCTA TGCGTGCAAG GGGTGCTCAG GTAACCGATA TCGTAATTCT CGTTGTTTCG GCCGACGACA GTGTTATGCC TCAGACAGTA GAAGCGATAA ATCACTCCAA AGCTGCAGGT GTTCCGATTG TTGTAGCTAT CAACAAGATT GACAAGCCTG ACGCAAATCC TGAGAAAATC AAGACGCAGC TTTCAGAGGC AGGCGTTCTG GTTGAGGACT GGGGTGGAGA ATATCAGTGT CAGGAGATCT CAGCCAAGCA GGGTACAGGT ATTGACGCGC TCATGGAGAA AGTATTGACT GAAGCTGAAA TCAGAGAACT GAAAGCAAAT TTCTCAGAGG ATGTTCCTTC AAGAGGTATT ATTGTCGAGG CGGAACTCGA CAAGGGAAAA GGAGTGGTCT CAACTGTTCT TGTGCAGCGC GGCTTTTTGA AAGTCGGAGA TCCGTTCGTT GCGGGTCACA CTATGGGCAA GGTAAGAGCG CTTATGGACG AACGGGGCAA AAGAATCCGC GAGGCGGGGC CTTCCCAGCC GGTAAGTGTG TTGGGATTTG AAGATTTACC GCAGTCAGGT GACCTGTTTA CGGTAATGCC TTCCGACAGG GAGGCAAGGG AAATAGCGCA GAAACGACAG ATAATACGCC GTGAACATGA GTTCAGGCGC AGTACCCGTG TGAAGCTCGA CAGTATAGCC CGCCAGATCA AGGAGGGGCT GATGAAGGAG TTGAGTGTGA TACTCAAAGC CGATACAGAC GGTTCTATAC AGGCTCTTGC CGACGGATTG ATGAAGATCC ATAACGATGA GGTTAAGGTG CAGATTATTC ATCAGGGTGT AGGTCAGATA ACCGAGACGG ATGTTCTGCT TGCTGCGGCA TCAGACGCGA TTATCATCGG TTTCCGGGTC AGGCCCAACG TGAACGCGAA GAGACTTGCA GAAAAAGAGG ATCTTGATGT ACGTTTCTAC AGTGTGATCT ATCATGTGAT TGAGGATATC GAGCAGGCGC TCGAAGGGAT GCTTTCTCCA GAACTCCATG AAGAGAGTAT CGGTTCTCTT GAGATACGCC AGGTGTTCAA AGTTCCGAAA ATCGGCAATG TCGCGGGTTG CTATATGCTT GAAGGAAAAA TATTCCGTGA TTCCAAGGTA CGGCTTTTAC GTGATGGGGT TCAGATCTAC GATGGTGTAC TCGATTCCCT CAAACGCTTC AAGGATGATG TCAAGGAAGT CGATGCAGGC TATGAATGCG GTCTGAACCT CAAGGGATAC AGCGACATCA AGGTTGGTGA TATTGTAGAG GGATATCGCA TTGTTGAAAA GAAACGAAAA CTATGA
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Protein sequence | MSPEGKEMRY RISDIARELQ VSPQEVLHFV KEAGGKVAST SSMVKGPMRD LILDQFSDEK KLVDETRKIR EEKQLRLSRL EEQSRKTYEK EQQLKDTISG RPERAAAKPR TEVPSESVEP EPVKEMPETV AEPEVTGVVS EPDENVAAVA EEVKSPVEET SETVAEKNDV EGQVSYEVPQ KIGGLTVFGT LDVQSSLGMG GEADKKKQRK KRFKEQADEL KDEFDIKAKE GGKEREAGGE SRKPVKKGSE ETKKTTVEST SAKKKKGKKK KKPEVDEKTI EKNIRSTISG MDDTSGSGSS RQKFRKMRKI EREKELEEAE AIKEAERSII RVTEFATAHE LADLMGILPK EIIQHCFTMG KFVTINQRLD KETIELVAME FGFDAEFVSE VEATEVTEIE DEEEELEIRP PVVTIMGHVD HGKTSLLDYI RSSNVVAGES GGITQHIGAY EVSLDGDRKI TFLDTPGHEA FTAMRARGAQ VTDIVILVVS ADDSVMPQTV EAINHSKAAG VPIVVAINKI DKPDANPEKI KTQLSEAGVL VEDWGGEYQC QEISAKQGTG IDALMEKVLT EAEIRELKAN FSEDVPSRGI IVEAELDKGK GVVSTVLVQR GFLKVGDPFV AGHTMGKVRA LMDERGKRIR EAGPSQPVSV LGFEDLPQSG DLFTVMPSDR EAREIAQKRQ IIRREHEFRR STRVKLDSIA RQIKEGLMKE LSVILKADTD GSIQALADGL MKIHNDEVKV QIIHQGVGQI TETDVLLAAA SDAIIIGFRV RPNVNAKRLA EKEDLDVRFY SVIYHVIEDI EQALEGMLSP ELHEESIGSL EIRQVFKVPK IGNVAGCYML EGKIFRDSKV RLLRDGVQIY DGVLDSLKRF KDDVKEVDAG YECGLNLKGY SDIKVGDIVE GYRIVEKKRK L
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