| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0217 |
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| Symbol | |
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| ID | 6373872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 209906 |
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| End bp | 211366 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642682735 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001958671 |
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| Protein GI | 189499201 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.01089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000111311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCAGTC TCATTGACGA GATCAAGGCC GAAGCGTTTA AGCCGGGGCC AGAAAAAAAA
GATGTTTTGG TACCGTCATT TTTGTCACTT TTGTCACCAA ATGAGATTCT TGAGCAGCTC
CTTGAGCAGA TCGAGCCGGT CAATTTTACC GAATTCACGG GTGGCGGAGA GGTTCGAGCA
GTCCATCACC GGATTTATGC TGTCAAAAGC GTTGTCCGTT TGGCTGAGCG CAAGAACTGG
GGGTTATGCA AAAGAAACGG GGCGGTTTAT GTTTTCACTG GGTCGCATTG GCGGCGGGTC
GAGGATGACG ATATGGAAGC GTTCTTGGGT ACGGCGGCGC TCCGGACAGG CGTTCCGAGG
TATCGAGCCG ATGATTACAA ATTCCGGGCA GAGCTGTTAA AGCAGTTCCA CAGCGAAGCA
CACTTGACAC AGCCAGAGCC AGATGCGGGG CGAACGCTTA TCAACCTGCA AAACGGGACA
TTTGAGATCA CGCAGCACGG CCAGCAGTTA CGAGAGTTCC GGCGCGCGGA CTTTCTGACG
CACGTTTTAC CATTCGAGTG CAGGGAGGAT GCTAAGGCGC CTTTGTTCCG GTCGTTCATT
GAGAGAGTTT TACCGGATCC GGATTCGCAG CGAGTTTTAG CGGAGTTCGT TGGTTACGTG
TTCATCCGTG GGTTGAAACT CGAAAAGGCG CTCATGCTTT ACGGCGGCGG CGCGAACGGG
AAGAGCGTCT TTTTCGACAT ACTTCTTGCC CTGCTTGGGT CAGACAATGC CAGCAGCTAC
AGCCTTGCCA GCTTGACCGA CAGCCGAAAT ACTTACTACC GGGCGATGCT TGCGGATAAG
CTTGTAAATT ACGCTTCTGA GATTAACAGT AAGGTCGAAG CAAGCATATT CAAACAGCTG
GTTTCAGGTG AACCGGTAGA GGCGAGGTTA CCGTACGGGA AACCCTTTAT TCTGAAGGAA
TACGCGAAAC TAATTTTCAA TGCGAACGAA CTGCCGAGAG ATGTCGAACA CACAAACGCA
TATTTTCGGC GGTTCCTGAT TATTCCGTTC ACGGTTACGA TCCCTGAGCG CGAGCAGGAT
AAAGAATTAG CCGGCAAGAT AATTGCCTCA GAATTGCCAG GGGTTTTCAA CTGGGCGTTA
GAAGGCTTGC GGCGGTTACT CCAACAGAAA AACCTCAGCA ATTGCGATGC CGCACGGCAC
GCGGTCGATC AGTATAAACG TGAAAGTGAT TCTGTTCAAA TGTTCGTTGA CGGTCGAGCG
CTTGAGCCTT CAGGTGTTGG CTTCGAGACA CTGGGAGACC TCTATAAAGA CTATAAGAGC
TTTTGTGCTG ATGACGGTTA CCGAGGATTA AATAAGCGGA ATTTCTCAAA GCGTTTGGAG
GCTTGCGGGT TTGAGAAGGT CAAGAGGGGG ATCGGGTGGG GGTTCGGTTG TTCCCGGCGC
GCGGATGAGG AGCCGTTTTA G
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| Protein sequence | MSSLIDEIKA EAFKPGPEKK DVLVPSFLSL LSPNEILEQL LEQIEPVNFT EFTGGGEVRA
VHHRIYAVKS VVRLAERKNW GLCKRNGAVY VFTGSHWRRV EDDDMEAFLG TAALRTGVPR
YRADDYKFRA ELLKQFHSEA HLTQPEPDAG RTLINLQNGT FEITQHGQQL REFRRADFLT
HVLPFECRED AKAPLFRSFI ERVLPDPDSQ RVLAEFVGYV FIRGLKLEKA LMLYGGGANG
KSVFFDILLA LLGSDNASSY SLASLTDSRN TYYRAMLADK LVNYASEINS KVEASIFKQL
VSGEPVEARL PYGKPFILKE YAKLIFNANE LPRDVEHTNA YFRRFLIIPF TVTIPEREQD
KELAGKIIAS ELPGVFNWAL EGLRRLLQQK NLSNCDAARH AVDQYKRESD SVQMFVDGRA
LEPSGVGFET LGDLYKDYKS FCADDGYRGL NKRNFSKRLE ACGFEKVKRG IGWGFGCSRR
ADEEPF
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