Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0196 |
Symbol | |
ID | 6373851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 193345 |
End bp | 194076 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682714 |
Product | ABC transporter-related protein |
Protein accession | YP_001958650 |
Protein GI | 189499180 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.440327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.450863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTG AAATTGTGGC AATAGATAAT CTTTCCGTTA TCATCAACGG AGCGAAGATT CTCGATAAGC TCTCTCTGTC TGTGGTTGAA GGGGAGTTTC TCGGTGTCGT AGGTCCTAAC GGCGGAGGGA AAACAACACT GCTCAAGGTT ATTCTCGGTC TGCTGCCGCC AGCCTCGGGA ACTGTCAGGA TTTTCGGCAA GTCACCCAGA CTGTCGAGGA AACGCATCGG CTATGTTCCT CAACGGTTGT TCTTTGACAG GGACTTTCCG GTTACGGTCA ACGATACTGT TCTTATGGGG CGTCTTTCTT CAAGAGGCCT GTTCGCGCGA TACGGAAAAG AGGACACGAT GATGGTTGAA CAGGCGCTGG AAACCGTAGG AATGGCCGGG CTGAAAAAAC ATCTTGTGGG CGAGCTGTCG GGCGGAGAGA TACAGCGGAT GCTTCTGGCA AGAGCTATGG TCGGACAACC TGAGCTGCTT CTGCTTGACG AACCTACTGC AAGCATCGAT CCTGAGATGA AAACAACCAT TTACGATCTG CTTGACAGGT TGCATGCCTC CGTGACGCTC ATTATGGTGT CGCATGATAC CGGTGCCATC AGCCGGCATG TCTCAAGGAC TGTTTGTCTC AGCTGCGGGA TGGTGACGCA CGGGCCGGGA GAGATCACCA GAGAAGAACT TTCAGGTATG TACCGTTATC CAGTCAATGT TGTCAAGCAC AAACATCCCT GA
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Protein sequence | MNREIVAIDN LSVIINGAKI LDKLSLSVVE GEFLGVVGPN GGGKTTLLKV ILGLLPPASG TVRIFGKSPR LSRKRIGYVP QRLFFDRDFP VTVNDTVLMG RLSSRGLFAR YGKEDTMMVE QALETVGMAG LKKHLVGELS GGEIQRMLLA RAMVGQPELL LLDEPTASID PEMKTTIYDL LDRLHASVTL IMVSHDTGAI SRHVSRTVCL SCGMVTHGPG EITREELSGM YRYPVNVVKH KHP
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