Gene Cphamn1_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0196 
Symbol 
ID6373851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp193345 
End bp194076 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID642682714 
ProductABC transporter-related protein 
Protein accessionYP_001958650 
Protein GI189499180 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.440327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.450863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTG AAATTGTGGC AATAGATAAT CTTTCCGTTA TCATCAACGG AGCGAAGATT 
CTCGATAAGC TCTCTCTGTC TGTGGTTGAA GGGGAGTTTC TCGGTGTCGT AGGTCCTAAC
GGCGGAGGGA AAACAACACT GCTCAAGGTT ATTCTCGGTC TGCTGCCGCC AGCCTCGGGA
ACTGTCAGGA TTTTCGGCAA GTCACCCAGA CTGTCGAGGA AACGCATCGG CTATGTTCCT
CAACGGTTGT TCTTTGACAG GGACTTTCCG GTTACGGTCA ACGATACTGT TCTTATGGGG
CGTCTTTCTT CAAGAGGCCT GTTCGCGCGA TACGGAAAAG AGGACACGAT GATGGTTGAA
CAGGCGCTGG AAACCGTAGG AATGGCCGGG CTGAAAAAAC ATCTTGTGGG CGAGCTGTCG
GGCGGAGAGA TACAGCGGAT GCTTCTGGCA AGAGCTATGG TCGGACAACC TGAGCTGCTT
CTGCTTGACG AACCTACTGC AAGCATCGAT CCTGAGATGA AAACAACCAT TTACGATCTG
CTTGACAGGT TGCATGCCTC CGTGACGCTC ATTATGGTGT CGCATGATAC CGGTGCCATC
AGCCGGCATG TCTCAAGGAC TGTTTGTCTC AGCTGCGGGA TGGTGACGCA CGGGCCGGGA
GAGATCACCA GAGAAGAACT TTCAGGTATG TACCGTTATC CAGTCAATGT TGTCAAGCAC
AAACATCCCT GA
 
Protein sequence
MNREIVAIDN LSVIINGAKI LDKLSLSVVE GEFLGVVGPN GGGKTTLLKV ILGLLPPASG 
TVRIFGKSPR LSRKRIGYVP QRLFFDRDFP VTVNDTVLMG RLSSRGLFAR YGKEDTMMVE
QALETVGMAG LKKHLVGELS GGEIQRMLLA RAMVGQPELL LLDEPTASID PEMKTTIYDL
LDRLHASVTL IMVSHDTGAI SRHVSRTVCL SCGMVTHGPG EITREELSGM YRYPVNVVKH
KHP