Gene Cphamn1_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0106 
Symbol 
ID6373750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp99949 
End bp100221 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content47% 
IMG OID642682623 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001958570 
Protein GI189499100 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT ACATTGGCAA TCTACCCTAC AGCTTATCTG AAGAGGAACT CAGCGATGCA 
TTCGCTCAAT TCGGTCAGGT AGACAGAGCG AACATTATCA TGGATAAAGA AACCGGCCGC
TCGAAAGGCT TCGGATTTGT TGAAATGCCA AACGACGATG AAGCACAAAA TGCTATCGAT
TCTTTGCATG ACAGTGATCT GAACGGCCGC TCTATCAAAG TCAATCAGGC AAGGCCCCGT
GAAGAGCGAC CCCCTCGGAG AGACAACTAC TGA
 
Protein sequence
MNIYIGNLPY SLSEEELSDA FAQFGQVDRA NIIMDKETGR SKGFGFVEMP NDDEAQNAID 
SLHDSDLNGR SIKVNQARPR EERPPRRDNY