Gene Cphamn1_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0087 
Symbol 
ID6373730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp80701 
End bp82158 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content51% 
IMG OID642682603 
Productcation transporter 
Protein accessionYP_001958551 
Protein GI189499081 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC CAGCGATATC TCACGTTCTG GGCGCTCTTC TCATGTTTAT CGGCAGCACC 
ATGCTCCTGC CCCTTGCCTG CGCCCTGATA TACAATGACG GTGATGCTCT CTCTCTGTTG
ATATCAATGG GGGTAACGGT CTCCATAGGA TTTCCCTTCT GGTGGAGTTT TCGAAAATAC
CGTGACCTGA CGCTGAAAGA CGGCCTTTTC ATTGTCACGT TCGGCTGGAT CCTCGTCTCA
TCTGTTTCAG CGTTGCCGTT CATGCTACAC GGTACCATAC CATCGTTTAC CGACGCTTTT
TTTGAAATGA TGTCCGGCTA CACAACCACC GGTGCAACCA TTCTCGACGA CATCGAATCA
GTCCCTCACG GCCTGCTTTT CTGGCGAAGC ACGACCCACC TCATCGGAGG CATGGGCTTT
ATCATGGTCA CCATCATCAT TCTCCCCCTC CTCGGTATAG GAGGGATGCA GCTCTACAAG
GCGGAAGCCG ATCCCGGTCA GGTCATAACC GGCGAAAAGT TTCTCCCTCG CGTCAAGCAG
ACCGCCGTGT GGCTCTGGGG AATCTACCTT GCCCTGATTC TCATCCAGTC ACTCCTGCTC
TGGATAGGAG GCATGCCTGT TTTCGACTCT CTCTGTCACG CTTTCGGCAC GGTTTCCACT
TCCGGTTACT CGACAAAGAA CAGCAGTATC GGCTATTACG ACAGCGCATG GATCGACTGG
ATAACCATCA TTTTCATGTT TCTCGGGGGC ATGGCCTTCA TGATGCATTA CCATATCCTG
AAAAAGGACT GGGAACCCGT CCGTAACAAC ACGGAAATAC GCTGGTACAT CGGTTTTGTC
GTGTTTATCA GCTTGCTTGC CACACTGATT CTCTGGGCTA CCGGAAGCTA TAGCGGATTC
TTCGATTCCA TACGCCATGC AACCTTCCAG GTTGTTTCAA TCCTGACAAC AACCGGATTT
ACCACCGCAG ACTATGAGCT TTGGCCTCAG TCTGCACAGA TGCTTCTCAT GATCGCCTGC
TTCATCGGTG CGTGTGCGGG CTCGACCACC AGCGGCATCA AGGTGGTGCA CTACGAAATC
ATCTGCAAAT ACCTCTACGC CAACGGCAGG AAGTTCCTGC AGCCTTTAGC CGTAGTGCCG
ATAAAGATCA ACCAGAAAAA TGTAGCCTCT TCCGTCGTAA CACTTGCAGT CAGTTACTTT
ATTCTCAACA TCTTTATGAT CTTTGTGGGC AGTGCGATCA TGACCCTGAT CGACGACATG
GATTTCTTCA GCTCCATGAG TGCGGTTATC TCTGCGCTTT TCAACATAGG GCCCGCCTTT
GGAGAAGTTG GCCCGACGCA CACCTTTTCC CATGTCTCAA CCGCAGGCAA ATGGTTTCTT
TCCTTCAATA TGCTTACCGG ACGCCTTGAG ATGTTCACCG TCATGGTGAT GTTCTACCCG
TCCTTCTGGA AAAAGTAA
 
Protein sequence
MNFPAISHVL GALLMFIGST MLLPLACALI YNDGDALSLL ISMGVTVSIG FPFWWSFRKY 
RDLTLKDGLF IVTFGWILVS SVSALPFMLH GTIPSFTDAF FEMMSGYTTT GATILDDIES
VPHGLLFWRS TTHLIGGMGF IMVTIIILPL LGIGGMQLYK AEADPGQVIT GEKFLPRVKQ
TAVWLWGIYL ALILIQSLLL WIGGMPVFDS LCHAFGTVST SGYSTKNSSI GYYDSAWIDW
ITIIFMFLGG MAFMMHYHIL KKDWEPVRNN TEIRWYIGFV VFISLLATLI LWATGSYSGF
FDSIRHATFQ VVSILTTTGF TTADYELWPQ SAQMLLMIAC FIGACAGSTT SGIKVVHYEI
ICKYLYANGR KFLQPLAVVP IKINQKNVAS SVVTLAVSYF ILNIFMIFVG SAIMTLIDDM
DFFSSMSAVI SALFNIGPAF GEVGPTHTFS HVSTAGKWFL SFNMLTGRLE MFTVMVMFYP
SFWKK