Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0058 |
Symbol | |
ID | 6373701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 57715 |
End bp | 58161 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642682579 |
Product | PilT protein domain protein |
Protein accession | YP_001958527 |
Protein GI | 189499057 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTTT ACATGCTTGA CACAAACATT GCCGGTCATG TCATCAAGGG AGACATACCT GCGATTCGTG AAAAGCTGGC ATCCGTCCCG ATGCAACATG TCCTCATCTC ATCAGTCACT CAGGCTGAAT TGCTTTACGG GCTGGCGAAA CGCTCCTATC CCAAAGGATT GTCCGCGCGA GTACACGAGT TTCTCATTCG TGTCGACATC CTTCCCTGGA ACCATGAAGT TGTAACGGTT TACGGCGATC TCAGAGCAAG ATGCGAGGCC TCAGGCATAT CACTATCCCC CCTCGACATG ATGATCGCCT CTCACGCAAA AGCCGCTGAC GCTGTTCTCG TCACAAGAGA CAGAGCATTC AGTCGAGTTC CTGATGGATT GAGGATTGAA ACTGGTAAGG AAATTGAGGC TATTATGTAT GTACACTTTT TTCACTATTT TGAATAA
|
Protein sequence | MPLYMLDTNI AGHVIKGDIP AIREKLASVP MQHVLISSVT QAELLYGLAK RSYPKGLSAR VHEFLIRVDI LPWNHEVVTV YGDLRARCEA SGISLSPLDM MIASHAKAAD AVLVTRDRAF SRVPDGLRIE TGKEIEAIMY VHFFHYFE
|
| |