Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0033 |
Symbol | |
ID | 6373676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 37806 |
End bp | 39665 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682555 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001958503 |
Protein GI | 189499033 |
COG category | [C] Energy production and conversion |
COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00652728 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG ATCCCCCCGA TTATGTAAAA AACACAAAAT TAATTGAGTG GGTACGTGAA ACCGCGGAAC TCTGTCAACC GGATTCCATC ATCTGGTGTG ACGGCACACA GGAAGAATAT GACACGTTGT GTCAGGAAAT GGTTGATAGC GGTACCTTTA CCAGACTATC GGATGAGAAG CGTCCGAACA GTTTCCTGTG CAGGTCTGAT CCCAGTGACG TAGCCAGGGT TGAGGACAGG ACCTATATTT GCAGCCTTCG CAGGCAGGAT GCCGGTCCGA CCAACAACTG GGTGCCGCCA AAAGAGATGA AAGCGACCCT GAAAGAACTT TATTCTGGGT GTATGAAAGG GCGCACGATG TATGTCATTC CGTTCAGCAT GGGTCCGCTT GGATCGCATA TAGCGCACAT TGGTGTAGAG ATAACCGATT CACCATACGT CGTGGTGAAT ATGCGTATCA TGACCAGAAT GGGTAGAAAG GTTATGGATA TTCTCGCAGA TGGCCGGGAT TTCGTGCACT GTCTGCATTC GGTCGGCGCG CCGCTTGAAA AGGGTGCGCA GGATGTCCCA TGGCCTTGTA ACGATCAGAA GTATATTGTC CATTTTCCTG AAGAGCGCTC AATAATGTCT TTCGGCAGCG GATACGGAGG TAACGCGCTG CTTGGCAAAA AGTGTTTCGC TCTTCGAATC GCCTCTTCCA TGGCTCGTGA CGAGGGATGG CTGGCAGAAC ATATGCTCAT TCTTTGTGTT GAATCTCCCG ATGGAGAAAA AACCTATGTG GCAGCCGCCT TCCCGAGTGC ATGCGGTAAA ACCAATTTTG CCATGCTTAT TCCTCCGGAC TCTTTTGAGG GATGGAAGGT TACTACGATT GGTGATGATA TTGCCTGGAT TAAGCCCGCT GAAGACGGCA GGCTCCACGC CATCAACCCT GAATACGGAT TTTTCGGAGT GGCGCCCGGC ACATCGGTAA AAACCAATCC GAACGCCATG GCGACCCTGA GTGCAAACTG TATTTATACC AATGTCGCAT TGACGCCTGA AGGCGATGTC TGGTGGGAAG GTATGACCGA TACCCCTCCT GAGTCGCTCA TTGACTGGCA GGGTAATGCA TGGACTCCTG ATGCAGGGAG GCCTGCAGCC CATCCGAACG CCCGTTTTAC CTCGCCTGCT TCTCAGTGTC CGAGTATCGA TCCCGAATGG GAGAATCCGG CGGGTGTGCC GATCGACGCC TTTATTTTCG GTGGTAGGCG CAGTAATCTT GTGCCCCTTG TCTACCAGTC GCCAAACTGG TATTTCGGAG TTTATCTTGC AGCTACCATG GGCTCTGAAA AGACGGCGGC GGCAGCTGGA AAAATCGGCG AGGTGCGTCG GGATCCTTTT GCCATGCTCC CCTTCTGCGG CTACCATATG GGCGACTATT TCACCCATTG GCTTCATGTC GGACGACTCC TTCAGGAGCC GCCAAGAATT TTCGGTGTTA ACTGGTTCCG CAAAGATGAA AACGGCAAGT TTCTCTGGCC CGGTTTTGGC GAGAACATGC GAGTGTTGAA GTGGATCGTC GATCGGGTGC ATGGGCGTTC GAGCGCAGTG GAAAGTCCTC TTGGCTGGAT GCCTAAATAT GAGTCCATGG AGTGGGATGG GCTCGACGAG TTCACTTTAG ACGATTTTTC AAAGCTTATG GCGGTTGATC GTGAAGACTG GAAGAAAGAG CTGTTGTCTC ACGAGGCGCT TTTTGAGAAA ATTTATGATA AACTGCCCAA GGAGTTCTCG CATATACGGG AGCTGCTTCT CTCGACCTTC TGGCTCTCTC CTGAGCATTG GGGGCTTGCC CAGGAGCGCT ATACGGGAGA GCATCACTGA
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Protein sequence | MRIDPPDYVK NTKLIEWVRE TAELCQPDSI IWCDGTQEEY DTLCQEMVDS GTFTRLSDEK RPNSFLCRSD PSDVARVEDR TYICSLRRQD AGPTNNWVPP KEMKATLKEL YSGCMKGRTM YVIPFSMGPL GSHIAHIGVE ITDSPYVVVN MRIMTRMGRK VMDILADGRD FVHCLHSVGA PLEKGAQDVP WPCNDQKYIV HFPEERSIMS FGSGYGGNAL LGKKCFALRI ASSMARDEGW LAEHMLILCV ESPDGEKTYV AAAFPSACGK TNFAMLIPPD SFEGWKVTTI GDDIAWIKPA EDGRLHAINP EYGFFGVAPG TSVKTNPNAM ATLSANCIYT NVALTPEGDV WWEGMTDTPP ESLIDWQGNA WTPDAGRPAA HPNARFTSPA SQCPSIDPEW ENPAGVPIDA FIFGGRRSNL VPLVYQSPNW YFGVYLAATM GSEKTAAAAG KIGEVRRDPF AMLPFCGYHM GDYFTHWLHV GRLLQEPPRI FGVNWFRKDE NGKFLWPGFG ENMRVLKWIV DRVHGRSSAV ESPLGWMPKY ESMEWDGLDE FTLDDFSKLM AVDREDWKKE LLSHEALFEK IYDKLPKEFS HIRELLLSTF WLSPEHWGLA QERYTGEHH
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