| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0012 |
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| Symbol | secF |
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| ID | 6373654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 15927 |
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| End bp | 16853 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642682533 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001958482 |
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| Protein GI | 189499012 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000296376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTGA TACATAAAAC GAACGTAGAC TTTCTTAAGA ACAGGAAGAT AGCCTATGTC
ATTTCTTTAA CCCTGATGCT TGCCGGAGTG CTGTCCTTGT TTGTAAAAGG ATTGAATTTC
GGTATCGACT TCAAGGGAGG GACGGAGGTT GTGCTTCGCT TTGAAGAAGA GGTGACTGTC
GGCGAAGTGC GGTCGGTGCT CAAGGAAGCG GGAGTGGAAG GAGCGGTGAA GCGATACGGG
GCTGATCGCT CTATTCTTCT GCAGACCGCT TTCGAGGGTA ATCTTAACGA TTTGAAGTCG
CTGGTGAACA ATGCGCTTGA TGACAGGATT GCAGATAATC CTCATGAGGT TTTGCGGATT
GATTCCGTTG GTCCCAGTAT TGCATCCGAT CTGAAATGGG CAGCCCTGAA AGCGCTTCTC
GGTGCTGTGA TAGCGATTCT GATATACGTA GGAATCCGCT TTGAGTTCAG CTTTGCTGTG
GCGAGTGTTA TGGCCATATT TCACGATGTG TTTATCGTTC TCGGTTTATT CAGCATTTTC
GGAGGTCTCT TTGATTATAT GCCTCTGGTT ATCGATCAGG GTGTTATTGC CGCTTTTCTG
ACTATAGCAG GCTACTCCAT CAACGATACA GTCGTTATCT ATGACAGGAT TCGTGAAAAT
ATCCGTTCAG GAAAATCCTC CGAGTATACC TCCACTTTCA ACCGCAGTCT CAATGAGACG
TTGAGCAGGA CGGTTATTAC TTCAGGAACC ACTCTTGTTG TCGTTCTTGT TCTGTTTTTC
TTTGCAGGCC CTGCTATTCG GGGATTTACC TTCGCGATAC TTCTCGGTAT CGTAATCGGT
ACCTACTCTT CATTGTTTAT CGCGGCTCCT CTTGTTCTCG ACTGGCAGAA GAAAACCAGA
CGTCCGATTA AACTCAGGGG GGGATAG
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| Protein sequence | MQLIHKTNVD FLKNRKIAYV ISLTLMLAGV LSLFVKGLNF GIDFKGGTEV VLRFEEEVTV
GEVRSVLKEA GVEGAVKRYG ADRSILLQTA FEGNLNDLKS LVNNALDDRI ADNPHEVLRI
DSVGPSIASD LKWAALKALL GAVIAILIYV GIRFEFSFAV ASVMAIFHDV FIVLGLFSIF
GGLFDYMPLV IDQGVIAAFL TIAGYSINDT VVIYDRIREN IRSGKSSEYT STFNRSLNET
LSRTVITSGT TLVVVLVLFF FAGPAIRGFT FAILLGIVIG TYSSLFIAAP LVLDWQKKTR
RPIKLRGG
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