Gene Cpha266_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2608 
Symbol 
ID4569200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2994147 
End bp2995340 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID639767173 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_913020 
Protein GI119358376 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000935009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAC TCAGCACTCA GGACTCAGCA CTCAGCACTT CAAAGCCTCG CGTTGCTCTT 
ATTACCGGCA TAACCGGCCA GGATGGTTCT TATCTGGCGG AGTTTTTGCT TGAAAGGGGT
TATGATGTGC ATGGCATCAA GCGCAGAGCC AGTTCTTTCA ATACCCAGCG TATCGACCAT
CTTTATCAGG ATCGCCATGA AATAGAAAAA TCTTCTTCAC TCAGTACGCA GGAAAAGCGA
GGATCGCTTT TCCTGCATTA CGGCGACCTG ACTGATAGCA GTAATCTTAC TCGCATTATC
TCGGAGGTGC AGCCTGATGA GGTTTATAAT CTTGGTGCAC AGAGTCATGT TGCGGTGAGC
TTTGAGTCGC CTGAGTATAC GGCTGATGTT GATGCCATGG GAACCCTTCG CCTGCTTGAG
GCGATCCGTT TTCTGGGGCT TGAAAAGAAA ACCCGCTTTT ATCAGGCATC CACTTCAGAG
CTGTATGGTC TGGTGCAGGA GATTCCGCAG CGGGAGAGTA CGCCTTTTTA TCCCCGCAGC
CCTTATGCTG TGGCGAAACT CTATGCTTAC TGGATTACGG TGAACTATCG TGAGGCTTAC
GGGATGTATG CCTGCAATGG CATCCTGTTT AACCATGAGT CGTCACGAAG GGGAGAGACC
TTTGTGACGC GCAAGATCAC CCGATGCCTT GCCAATATTA CTCAGGGGCT CGAAGAGTGT
CTGTATGTTG GCAACATGAA TGCCCTGCGT GACTGGGGTC ATGCGAAGGA TTATGTGCGC
ATGCAGTGGA TGATGCTGCA GCAGGAACAG CCGAGGGATT ATGTTATTGC GACCGGCGTG
CAGTACAGTG TCCGTCAGTT TATCGAAAAG GCTGCCGTAC AGCTTGGCAT CACCATTCGC
TGGGAAGGCA CCGGTATCAA CGAAGTCGGT ATTGTTGATT CACTCAGTAT TCAGCACTCA
GCACTCAGCA CTGGTTCAGT TATTGTTCGG GTCGATCCGC GTTACTTCAG GCCTGCTGAG
GTTGAGACCT TGCTTGGGGA TCCGGCAAAG GCGAAAGCTG ATCTTGGCTG GGTACCGGAA
ATTACGCTTG ACGAGATGGT CGAGGAGATG GTAGCGTACG ATCTCGATCT CGCCCGGCGT
CACGCCCTCC TCAAAGCCAA TGGTTATACC GTGGAGGTCA GCAAGGAGAG TTGA
 
Protein sequence
MSLLSTQDSA LSTSKPRVAL ITGITGQDGS YLAEFLLERG YDVHGIKRRA SSFNTQRIDH 
LYQDRHEIEK SSSLSTQEKR GSLFLHYGDL TDSSNLTRII SEVQPDEVYN LGAQSHVAVS
FESPEYTADV DAMGTLRLLE AIRFLGLEKK TRFYQASTSE LYGLVQEIPQ RESTPFYPRS
PYAVAKLYAY WITVNYREAY GMYACNGILF NHESSRRGET FVTRKITRCL ANITQGLEEC
LYVGNMNALR DWGHAKDYVR MQWMMLQQEQ PRDYVIATGV QYSVRQFIEK AAVQLGITIR
WEGTGINEVG IVDSLSIQHS ALSTGSVIVR VDPRYFRPAE VETLLGDPAK AKADLGWVPE
ITLDEMVEEM VAYDLDLARR HALLKANGYT VEVSKES