Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2478 |
Symbol | |
ID | 4568832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2849847 |
End bp | 2851529 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639767037 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_912890 |
Protein GI | 119358246 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.148439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA TGAATTATCA TAAGTACACA GCGTATCCCG CTGTCGGAAT TGCCAACAGG AGCTGGCCGG ATCAAACCAT AACAAAAGCT CCGATATGGA GCAGCGTGGA TTTGCGTGAC GGCAATCAGG CGCTTCCCGT TCCTATGAAC GTGGATGAAA AAGTCGCCAT GTTTCAGCTT CTCGTCTCTG TTGGGTTCAA GGAGATTGAG GTTGGGTTTC CTTCGGCGTC GGCTACCGAG TTCGCTTTTG TTCGAAGACT GATTGAAAAT GGTCTTATCC CTGACGATGT GACGATTCAG GTGCTGACCC AGGCTCGCGA GCATCTTATA AGAAAAACTT TCGAGGCCAT CAAGGGAGCT CGGCATGCTA TCGTGCATCT TTACAATTCG ACTTCACGTC AGCAGAGGGA GCAGGTTTTT CGGATGAACA AGGAAGAGAT CAAGGAGATT GCCGTTACAG GTACGGCGCT CGTTCGCCGC CTCAAAGAGG AGAGCGGTAG CGCAGGGATC CGTTTCGAGT ATAGTCCGGA GAGTTTTACC GGGACTGAAC TTGAGTATGC GCTTGAGGTT TGTCATGCTG TTATGGATGC TTGGGGCGCT TCAGCACAGG ATAAAATCAT TCTCAATTTG CCTTCGACCG TTGAAATGTC GCGTCCGAAC ATCTATGCCG ACCGCATCGA GTGGTTTTGT CGCAACATCA AGGAGCGCGA TGCCGTGCTG ATCAGCGTTC ATGCTCATAA TGATCGGGGA ACAGCGGTTG CTACCGCCGA GTTTGCCGTC ATGGCGGGTG CAGACAGGGT TGAAGGGGCC CTGTTTGGTA ATGGCGAGCG GTGCGGAAAT ATGGATATCG TGGTTATGGC GCTCAACCTG TTCAGCCAGG GCGTCGATCC CGAGCTCGAT TTCAGCGACC TTCCCCGAAT TCGCGAGGTC TATCGCAAGT GTACCCGTAT GGATATTCAT GCGCGTCAAC CCTATGCCGG AGAACTTGTC TATACGGCGT TTAGTGGATC GCACCAGGAT GCTATCAGCA AGGGTATGAA GGCGCACAAG ATGTCCTCAG ACGGAATCTG GGATGTTCCT TATCTGCCGA TAGATCCGGG AGATGTCGGG TGCAGTTATG AAGCGATAGT CCGTATCAAC AGTCAATCCG GCAAGGGGGG TGTTGCGTAT GTGCTCGAAA AGGATTACGG AATACAGATT CCGAAATGGA TGCAGCCTGA TTTTGCTGAA GCCGTTCAGG CTGTTGCAGA TCGTACCGGG GAGGAGTTGT CGCCTGAAGA GATTCATTCC CTGTTTCACA AAGAGTATGT GACGCTTAAG GAGCCTTTTG CGCTTAAGAA ATGTCATATC AGTTGGGATG ACGAAGAACC GGATCGTAAT GATGAAGAGG CTACGATTAT TGCCTGTGTG GTACAGATGA AGGAGCAGGA GTTCAGGCTT GATGCAGTCG GTAACGGTCC GGTTGATGCG TTTGTCAAGG GTTTTGTCGC TGAGAGCGGT ATCGAGTTCA GCGTTGAGGA TTATATCGAG CATGCAATTG GTCGTAGCGC CGGCGCGCTT GCTGTTGCCT ATGTCAGGAT CGGTTGCCCC GATGGCAGGG TCTCTTATGG CGCCGGAATC GATTCCAATA TCAGTCTTGC ATCGATCAAG GCGATCGTCA GCGCCCTGAA CAGGCTTCCC TGA
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Protein sequence | MKTMNYHKYT AYPAVGIANR SWPDQTITKA PIWSSVDLRD GNQALPVPMN VDEKVAMFQL LVSVGFKEIE VGFPSASATE FAFVRRLIEN GLIPDDVTIQ VLTQAREHLI RKTFEAIKGA RHAIVHLYNS TSRQQREQVF RMNKEEIKEI AVTGTALVRR LKEESGSAGI RFEYSPESFT GTELEYALEV CHAVMDAWGA SAQDKIILNL PSTVEMSRPN IYADRIEWFC RNIKERDAVL ISVHAHNDRG TAVATAEFAV MAGADRVEGA LFGNGERCGN MDIVVMALNL FSQGVDPELD FSDLPRIREV YRKCTRMDIH ARQPYAGELV YTAFSGSHQD AISKGMKAHK MSSDGIWDVP YLPIDPGDVG CSYEAIVRIN SQSGKGGVAY VLEKDYGIQI PKWMQPDFAE AVQAVADRTG EELSPEEIHS LFHKEYVTLK EPFALKKCHI SWDDEEPDRN DEEATIIACV VQMKEQEFRL DAVGNGPVDA FVKGFVAESG IEFSVEDYIE HAIGRSAGAL AVAYVRIGCP DGRVSYGAGI DSNISLASIK AIVSALNRLP
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