Gene Cpha266_2423 details

Gene Information

• Locus tag: Cpha266_2423
• Symbol: rplC
• ID: 4569490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: -
• Start bp: 2797940
• End bp: 2798569
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 639766982
• Product: 50S ribosomal protein L3
• Protein accession: YP_912835
• Protein GI: 119358191
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00498434
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGCGA TTCTTGGAAA GAAAATCGGC ATGACCCGTT TATACAATGA TAAACGCGAA 
GCTATATCCT GCACTATTAT TCAGGCAGGT CCATGCTTTG TGACGCAGGT AAAGCATGCA 
GAGAAAGACG GATACGATGC TTATCAGATC GGTATCGGAG AGAGGGATGA AAAAAAGGTG 
AACAAGCCGA TGCTTGGTCA TTACAAGAAG GCGGGAGTTA CGCCGGGTTA TAAAATTGCA 
GAATTTTCGA AGAGCGAAAT AAATCTTGAG CTTGAAGCTG GCGCGCCTCT TGATCTTTCA 
GTATTCAAGG AAGGTGAAAA GATCAATGTG CTTGGTGTTT CAAAGGGTAA GGGTTTTGCT 
GGTGTTGTCA AACGCCACAA TTTCGGTGGC GGTTCAAGAA CGCATGGTCA GTCGGACAGG 
CTGAGAGCGC CGGGTTCAGT AGGTGGTTCG TCGGATCCGT CAAGAACCTT CAGAGGAACA 
AGAATGGCAG GACGTATGGG CGGTTGCAAT ATCACCGTCA AGAATCTTGA GATTATCAGA 
ATCATGCCTG AATCAAATCT GCTTGTCGTC AAGGGTGCCA TACCCGGGCC TAAAAACTCC 
TACGTAAAGA TTGTTTCAAC AAAAAAGTAA 

 

Protein sequence

MGAILGKKIG MTRLYNDKRE AISCTIIQAG PCFVTQVKHA EKDGYDAYQI GIGERDEKKV 
NKPMLGHYKK AGVTPGYKIA EFSKSEINLE LEAGAPLDLS VFKEGEKINV LGVSKGKGFA 
GVVKRHNFGG GSRTHGQSDR LRAPGSVGGS SDPSRTFRGT RMAGRMGGCN ITVKNLEIIR 
IMPESNLLVV KGAIPGPKNS YVKIVSTKK