| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2422 |
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| Symbol | rplD |
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| ID | 4569489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2797294 |
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| End bp | 2797920 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639766981 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_912834 |
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| Protein GI | 119358190 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00578828 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTTA AAGTCTTAAA TACCAGCGGT ACAGAAACGG GAGAGGTTGT TACGCTCAAT
GAGGAGATCT TTGGCGTGGA AGTATCCGAA CACGCAATGT ATCTTGATGT AAAATCAATA
CTTGCTAATA AAAGGCAAGG AACTCATAAG GCTAAAACCC GTGCTCAGGT AAGAGGCGGC
GGTAGAAAAC CCTACCGGCA GAAAGGTACA GGTAACGCTC GGCAGGGCTC GACCCGTTCT
CCGCTGATGA TTGGAGGTGG AACGATATTC GGCCCTCAGC CAAGATCCTA TGACCAGAAA
GTCAATAAAA AAGTCAAGCT GCTTGCTCGT CGTTCGGCGC TGAGTGCAAA AGCTAAAGCT
GGAAAGATAC TTGTTATTGA GGATTTCAGG CTTGATGCCA TTAAAACAAA GCCCGTCGCG
GAAATTCTCA AAAATCTCGG TCTTGAGCAG AAGAAAATAC TTATGCTGAC TCCCGAGTAT
GACATGATTA TTGCGCGGTC TGGAAGAAAT ATACCGGTTC TCAATATCAT GACTGCCGAT
AAAGTATCTA CTTATGATAT TCTCAACAGC AGCGCGATAT TGTTCCAGAA GACGGCTCTG
ACGAAAATCG AGGACACATT AGGGTAG
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| Protein sequence | MELKVLNTSG TETGEVVTLN EEIFGVEVSE HAMYLDVKSI LANKRQGTHK AKTRAQVRGG
GRKPYRQKGT GNARQGSTRS PLMIGGGTIF GPQPRSYDQK VNKKVKLLAR RSALSAKAKA
GKILVIEDFR LDAIKTKPVA EILKNLGLEQ KKILMLTPEY DMIIARSGRN IPVLNIMTAD
KVSTYDILNS SAILFQKTAL TKIEDTLG
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