Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2361 |
Symbol | |
ID | 4569619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2746059 |
End bp | 2747387 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639766919 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_912773 |
Protein GI | 119358129 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.166374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGAG CTCGCAGAAA ATTCTATATC CATACTTTTG GATGCCAGAT GAATCAGGCC GACAGCGGTA TAATTACGGC ACTCCTGGAA AAAGAGGGAT ATCAGCAGGC CGCTTCGGAA GAGGAGGCAG GCATCATTAT GCTCAATACC TGTGCGGTCA GGGAGAACGC CGTTGAACGC ATTAGCCACT ACCTTCAGCA TGTGAAGGGG TTCAAGAGAA AGTGCCCCGA ACTGATTGTC GGTCTCACCG GCTGTATTCC CCAGTATCGC AGGGAAGAAC TGTTTACCGT TTTTCCCGTG ATCGATTTTC TTGCGGGCCC CGACACCTAT CGAGTTCTTC CCGCACTGAT TGCCGAGGCA GGAGATAGCC GGTCGGCACG GCTTGAATTC AATGCTTTCG AGACTTATGA TGGCGTCAGA CAGGCAAGAA CGCAATCACT CAACGCTTTT GTGCCGATTA TTCGGGGCTG CAACAACATG TGTGCTTTCT GCGTCGTTCC ATTCACCAGA GGACGTGAAC GCAGTCACCC GTTCGAATCG GTTCTCGACG AGGTTCGTGC GCTTGCCGAC GACGGCTGCA GAGAGATAAC GCTGCTTGGT CAGAACGTCA ATTCATACCA TGATCCTGCA TCAGGTGCAG ATTTTTCCCG GTTGCTCGAT GCGGTCAGTC GGGAAGCTCC CGAAACGCGA ATACGGTTTA CTACCTCCCA TCCGAAGGAT ATGTCGCACT CGCTTGTGGA AACGATGGCA TTACGGCCGA ATATCTGTAA TCATCTTCAT CTGCCGGTGC AGTCCGGTTC GACGCGTATG CTTGCTCGAA TGAACAGAGG ACACGACATC GAGGAGTACC GGAATAAAAT AGAGCTTCTT CGCAAATGGA TTCCTGGTAT ATCGCTTTCT ACCGATCTTA TCGCGGGCTT TTGCGGCGAA AGTGAAGCTG ATCATGACCA AACGCTCGAA CTGATGCGCG AAGTCCGTTT CGATTCGGTC TTCATGTTTT ACTATTCCGT CAGACAGGGA ACACTTGCAG CCCGAACCAT GCCCGATGAT GTGCCTGAAG AGGTTAAAAA GCAGCGGCTG CAGGAGATTA TCGATCTGCA GAATGGTATT TCTGCGGAGC TGCTTGGCCT GGCGCCTGGT TCTGTCGTTG AAGTTCTTGT CGAATCGGAA AGTCGTCGTT CTTCCGATCA GCTTATGGGA AGAACTGACG GCAACAGGGT TGTGGTATTC GACCGGGGCA TCCATCAACC CGGAGATTTG GTCAGGGTTA TGATTACCGG GTCGACTTCG GCAACTCTTT TCGGTCAGTC GGCAGAGAAT CTGCAATGA
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Protein sequence | MPRARRKFYI HTFGCQMNQA DSGIITALLE KEGYQQAASE EEAGIIMLNT CAVRENAVER ISHYLQHVKG FKRKCPELIV GLTGCIPQYR REELFTVFPV IDFLAGPDTY RVLPALIAEA GDSRSARLEF NAFETYDGVR QARTQSLNAF VPIIRGCNNM CAFCVVPFTR GRERSHPFES VLDEVRALAD DGCREITLLG QNVNSYHDPA SGADFSRLLD AVSREAPETR IRFTTSHPKD MSHSLVETMA LRPNICNHLH LPVQSGSTRM LARMNRGHDI EEYRNKIELL RKWIPGISLS TDLIAGFCGE SEADHDQTLE LMREVRFDSV FMFYYSVRQG TLAARTMPDD VPEEVKKQRL QEIIDLQNGI SAELLGLAPG SVVEVLVESE SRRSSDQLMG RTDGNRVVVF DRGIHQPGDL VRVMITGSTS ATLFGQSAEN LQ
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