| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2348 |
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| Symbol | |
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| ID | 4569606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2726102 |
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| End bp | 2732017 |
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| Gene Length | 5916 bp |
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| Protein Length | 1971 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639766906 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_912760 |
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| Protein GI | 119358116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.714224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GAAGACTTTC CCTTGCCCTT CTGCTTGCCA TGCTCGCATG GGCACCTGAA
AATGCCTTGT CTGTACCAGT GCCGACGTAT TACTGGGATG GATCGGGACT TGCTGCTGAT
AATATCGTGA GTGGAGGAAC CGGTACCTGG AACATCGGAA ACAACAACTG GACAAATTTC
GCCGGTTCAG CAAACTCCAG TTGGACAGCA GGCAGTATCG GTGTGTTTGC AGGGGTTTCA
GGGAGTGTTA AAGTTAAAGG CGCACAGGAG ATTGCGGGCC TGGAGTTCAC GGCTGACGGA
TATGTTCTCA CTCAGGGCGC TGCGGGAGCA TTGCATCTGG TCGGTGCTGG TTCAGGCACC
AGCATTATCG ATGTCTCAGG TAATGCCGCA ACCATTGTTA CAGATATCAC TGGTGATACC
GGCATCGGGC TTGAAAAGAC CGGAACCGGT ACGTTGACCC TGAGCGGAGA AAATACCTAT
ACAGGTACGA CAGATATCCA GGCAGGGAAG CTGGTGCTGA ATGGCGGTGA AGCAATTAAA
GATACCGGCA CGGTCAATGT CGGTGCCGCT GGTATGCTCC AGCTTGGTAA CCATAATGAA
ACGATCGGCG CACTTACCGG TTCCCCTGGC AGTCAGGTTG ATCTGAAAAG CTATACGCTG
ACGACAGGAA ATGATGTTGA ATCATTCTTT CACGGGGTCA TTTCAGGATC CGGCGGATTG
ACGAAAGTTG GACTCGGCGG TTTTAATCTG CTCGGGGCTA ATACTTATAC GGGAGCAACG
ACAATCAGTG TCGGTACGCT CAGGGCAGGA GCCGCAAATG TGATTGCTGA TGGATCGGCA
GTTACGGTGG CGTCGGGTGC TACGTACGAT CTGAACAGCT ACAGTGATAC GGTGCGTTCG
ATAGCCGGAG CTGGAAATAT CACCCTTGGC AGTGCAACTC TGACAGCAGG TGATAATGAC
AATGCCGAAT TTGCAGGAGT GATTTCCGGA AACGGAGGAT TGACGAAAGC GGGAACGGGC
ATCCTTACCC TGAGCGGTTC AAACATCTAT ACCGGTTTGA CTGATATCCG GAAAGGTACG
CTGTTGCTGA AAAGCGGATC GGCGATTGCC AATAATGCCG CGGTTAATGT TGGAGCCCAG
GGTTTGCTGA AACTTGGTAA TGATGATGAA ACTATCGGTT CACTTGCCGG TGATGCCGGC
AGTCAGGTTA ACCTGCAAAG CTACACCCTC AAGACGGGCG GAAACAACAG CAGCACCGAA
TTTGCAGGAG TGATTTCCGG AACCGGCTCT CTGACAAAAG CGGGAACGGG AACCTTCACC
CTGAGCGGCA ACAATACGTA CAGCGGTGGT ACAGCCCTGA AGGAGGGCAC TCTGGCTGTT
GCTAAAAATG CCGCACTGGG TACAGGAGAT CTTGGTATGG CAGACGGCAC AACGCTGCAG
GCAGCTGCAA CGGTCTCTCT TGCCAACAAC GTAACACTGA CCGGCGCCGA CAAGTTTGAT
ACTGTGGCTT ACAAGATGGC GCTGACAGGC GTATTATCCG GTAACGGTTC ACTGACAAAG
CTTGGAACAG GCAGGTTGAC CCTGAGTGGC AACAATACAT ACAGCGGTGG TACAGCCCTG
AATGAGGGTA CTCTTGCGGT TGGCAGCAAC ACCGCACTGG GCTCAGGGGC ACTCAGTATG
GCAGATGGTA CAACGCTGCA GGCTGCGGCA ACAGTTACTC TTGCCAACAA TGTTACCCTG
ACAGGCACAG ACAGGTTTGA TACCGATGGA TATGACATGG CAATGACAGG CGTGATATCC
GGCTCCGGTT CATTGAGAAA AATCAGTGCG GGTACCTTGA CACTGAGCGG AGCAAATACC
TATAATGGAG AGACTGTAAT CAATGCAGGA ACGCTCAAAG CCGGAGCCGC AAATGTGATT
GCTGATGGAT CGGCAGTTAC GGTTGCGTCA GGAGCAACGT ATGACCTGAA CAACTTCAAC
GATACGGCAG GATCGATAGC GGGCGCGGGA AGCATCACTC TTGGAAGTGC ATCACTCGGA
GCCGGTGGTG ACAACAGCGA TACACTCTTC AGCGGCGTGA TTTCTGGTAG TGGCGGATTG
ACGAAACTGG GAACAGGAAC GTTGACCCTG AGCGGATCAA ACAGTTACAC CGGCCTGACT
GACATTAAGG ATGGTATGCT GCTGCTGAAA AACGGTTCAG CGATTGTCGA TACCGGAGCG
GTCAACGTAG GGTCTGATGG TGAACTGAAG CTTGCTGACA ATGAAACTAT CGGCTCGCTT
GCCGGTGTTT CGGGCAGCCA GGTTATCCTG CAGGGCAACA GGCTGACGAC CGGTGGTAAT
AACGATATTT CGACTGAATT TGCGGGCGAA ATTACCGGCA ACAGCATTGG TGGATTGACC
AAAAAAGGTA CAGGCATCTT TACTCTCAGC GGAGCGAACA CCTATAAGGG CCTCACCGAC
ATTCAGGGCG GTACGCTGCA GCTTAATGGC GGTTCGGCGA TTGCCGATAA CGCTGCGGTC
AATGTTTGGG CTTTGGCTGC ACTGAAGCTT GGCGCCGATG AAACCATCGG TTCGCTGGCA
GGCGTATCCT TCAGTACGGT TAACCTGCAG GACTACACGC TGACAACAGG CGGTAACGAT
GATTCGACCG AATTTGCGGG CGACATTACA GGAAATGGCG GAGTCAACAA ACGCGGAACC
GGCACCATGA CTCTGAGCGG CATTAACAGG TACACAGGCC TTACTGATAT TTATAACGGG
ACACTCCTGC TCAATGGCGG AATGGCTATT GCCGATACCG GAGCTGTCAA TGTGCGAGTC
AACGGAACAC TCAAGCTTGG TGCCGATGAA ACCATCGGTT CGCTGGCAGG TGTTTCGGAC
AGCGCAGTCG ATCTGCAGGG CTACAGATTG ACGACCGGCG GAAACAACAG CGACACCCTG
TTTGCAGGTG AGATCGCCGG TACCGGCGGA GTGACCAAAA CAGGAACAGG CACCTTTACC
CTGAGCGGAA CAAATCTTTA TACCGGTCTC ACCGATGTTC AGCATGGCGT TCTGCTGCTG
AAAGATGGCT CGGCAATTGT CGATAACGCT GCGGTTAATG TAGGTGCCGA TGGAGTGCTC
AGGCTTGGCA ATGCTGATGA AACCATTGGT TCGCTTGCCG GTGATCACGG CAGCAGGGTT
AATCTCCAGG GGTATACGCT TACGACCGGA GGAGATAACA GTGATACCGA CTTTGCAGGT
AAAATTATTG GTACGGGCGG ATTGATCAAA AAAGGAATCG GGTACTTCAT GCTGTGCGGA
ACGAACACCT ATAGCGGTGT AACCGATATT CAGGCCGGGA CGCTCCAGCT CAATGGCGGT
TCGGCGATTA TCGATACCGG AGCGGTTACA GTTGCTGCTG CCGGCACCTT GAAGCTTGGT
GCGGATGAAA CTGTCGGTTC GCTGGCAGGC GTTTCCGGCA GCCACCTTGA TCTGCAAACT
TTTACGCTTA CATCGGGTGA TGCGAATAAT ACCGGATTTG CAGGAGCGAT TTCCGGTGCC
GGCGGGTTGA CGAAGCAGGG AACAGGCATC TTTACCCTCA GCGGCGATAA CGTCTACGCC
GGAGGAACAG ACTTGAACGA GGGTACTCTG GCCGCAGGCA GCAATACTGC GCTTGGCACC
GGTGCTCTTT CCATGGCAGA CGGGACAACG CTGCTGGCAG CGGCATCAGT TGCCCTTGCC
AATAATGTAA CCCTGGCAGC AGGTATGGAG ACGGTTAATA CACAGGCCTT CAGTATGACG
CTTTCAGGCG ACATCACAGG CGAAGGAAAA CTGATCAAAC AGGGAGCAGG CACCCTTACT
CTCGACGGAA GCAACAGCTA TACCGGCGGT ACACTGGTGA GTGCCGGACT GCTCAAGGGA
AATACCGGAA GCCTGCAGGG CGACATTGAA AATAACGCAG GGCTTGAGTT TGACCAGAGT
TTCGATGGAA CCTATGCTGG CGCATTGAGC GGTACCGGTA ATCTTGCCAA AAGCGGAACA
GGTGCGCTAA GCCTCTCAGG TGGTGTATCA CAGGCTGATT TCTCCATAGA GAATGGCGCG
GTGACCAACA GTGCGGCAAT GACACTTTCC GGTTCGATTG ATCTGTCTGC CGGAACCATC
CTGAACAACG GCGTTGGCGG TAGTATAACA ACAGTTTCAG GAATCAATGG CAGTAACGGT
GTTGATCGTA TTGAGAACAG CGGTTTCATC ACGTCGGACA TCGAACTTGG CGATGGTAAT
GACTTGCTCG ACAACTCGGG AACGCTTGTT GCTGCAAACA AGGTTGATCT GGGCTCGGGC
GACGATGAGA TGACAGTGAG CGGTCATGCC CTTATTTCAG AAGTGGCACT GCTTGACGGT
GGTGCTGGTA CCGACACCCT TGTTTTTGAT GGCTGGACAG GCAATCCTGA AGACGGCAAA
GGTTATCTCG GCGCTCAGGT GGAAAACTGG GAGAACGTTC AGTTAACGAA CAACTCCATG
GTGCACCTTG GTGTTGGCGC CATGCCGAGA ACTCTTGGCC TGGGAGAACT CTCCATTGAA
GCAGGATCAA CGATCTTTGC TTACGGAGCA TCACCCGGAA CCTGCACGCA GTCCGGCAAT
GTCATCAATG GCGGGATGAT CACCCTTATC GACCCGGTCA AAACCGGCGG AGATGACGAT
TCACTGACCA TTGTCGGAAA CTATACCGGT ACAGGGACGC TTGGACTTGA TGTCAATCTT
GGTACTGGCG GTTATGACAA GTTCATCATT GACGGAGCAG CATCAGGAAA GACCACGGTT
GTGCTGCAGG AGGTTGGAGA CAGCTCTGTG CTTATCCGCG ACTCAAAACT TGGGTTGATC
TCTGTCGGCA AAGGTGGTAC GGACAGCTTT ATTCCCGGCG AATATCACTA TGGTGCCTCG
ATTTATGATT TCAACATGAC CTATGATGCC GGAACAGAAA GCTATCTTCT CAGCAACTTC
ATCTTGCGCA ACTATCAGGA GACGGTAGCT GTACTGCACG GAGTGATGCC GTTTATCGAG
AGAATGGGCA GTGAATCGGT AAGCCGCTTT CACGAGCGCA CCAATGAAGG GTGTGGCTGG
TGGAGCAGAG CCTATGGAAG CGATTATCAG CTCGATATCA ATGGAAGAGC AGGAAGCAGC
CTGAACGGCG AAACGGCAGG CATGCAGGTT GGTGCTGATC TGGGATCTGG CTGTCAGAGT
GACGGCTTGG GCTGGAACGC CGGTGTGTTT GCCGGAACCG GTTACGGCAA TGCCGATGTT
GCCGGTTTCA ACACCGACAA GGCTGGAGAG TTGAAAGACT ATGCTTACAG CATGGGATTG
TATGCAGGCG TGAGGGCGAG CGAAAGCTTC TGGATAAACG CTGTTGCGCT GGCAACCTAT
CATGATCTTG AACTGAATAT TGTGGAAGGT GCGGAACAGT TCAACAGAAA TGTGTGGAGC
ATGACCGCTT CGCTTGAAGC CGGCTTTACC CTGCCGCTCA GCGATTCGTT CCGTCTTGAA
CCGCAGACAC AGCTCATCTA CCAGCATACT GGAGACCTGA CGGTGACAAG GCCTGATATC
GGTGAAGCAA GCCTGCTGAG CCACGACGGC TTGATTGGCA GGCTCGGTAT TGCCGGTATA
GCAGGAAACA GCAGAACGGA AGCAACTCCG TTCTTTGAAG TGAATGCCGT CAAAGAGTTC
TCCGGTGATA CGGAAGTGCT CTATGTGAGG AACAACGAAA CGCTGAAAAC CACGCCGGAT
ACCCTGTTTG TAGGTGGGGC TTTAGGCATA AGGCGCGAAG CCGGTGAAAA GGAAGGACTC
GGTTACTTCA TCAAAGGAGA AGCGATGTTC GGCGTTGATA GCGGCAGTTC TTCGCATACC
TACGGTCTGA GCGCAGGAAT CAGCAAGGCA TTCTGA
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| Protein sequence | MKKRRLSLAL LLAMLAWAPE NALSVPVPTY YWDGSGLAAD NIVSGGTGTW NIGNNNWTNF
AGSANSSWTA GSIGVFAGVS GSVKVKGAQE IAGLEFTADG YVLTQGAAGA LHLVGAGSGT
SIIDVSGNAA TIVTDITGDT GIGLEKTGTG TLTLSGENTY TGTTDIQAGK LVLNGGEAIK
DTGTVNVGAA GMLQLGNHNE TIGALTGSPG SQVDLKSYTL TTGNDVESFF HGVISGSGGL
TKVGLGGFNL LGANTYTGAT TISVGTLRAG AANVIADGSA VTVASGATYD LNSYSDTVRS
IAGAGNITLG SATLTAGDND NAEFAGVISG NGGLTKAGTG ILTLSGSNIY TGLTDIRKGT
LLLKSGSAIA NNAAVNVGAQ GLLKLGNDDE TIGSLAGDAG SQVNLQSYTL KTGGNNSSTE
FAGVISGTGS LTKAGTGTFT LSGNNTYSGG TALKEGTLAV AKNAALGTGD LGMADGTTLQ
AAATVSLANN VTLTGADKFD TVAYKMALTG VLSGNGSLTK LGTGRLTLSG NNTYSGGTAL
NEGTLAVGSN TALGSGALSM ADGTTLQAAA TVTLANNVTL TGTDRFDTDG YDMAMTGVIS
GSGSLRKISA GTLTLSGANT YNGETVINAG TLKAGAANVI ADGSAVTVAS GATYDLNNFN
DTAGSIAGAG SITLGSASLG AGGDNSDTLF SGVISGSGGL TKLGTGTLTL SGSNSYTGLT
DIKDGMLLLK NGSAIVDTGA VNVGSDGELK LADNETIGSL AGVSGSQVIL QGNRLTTGGN
NDISTEFAGE ITGNSIGGLT KKGTGIFTLS GANTYKGLTD IQGGTLQLNG GSAIADNAAV
NVWALAALKL GADETIGSLA GVSFSTVNLQ DYTLTTGGND DSTEFAGDIT GNGGVNKRGT
GTMTLSGINR YTGLTDIYNG TLLLNGGMAI ADTGAVNVRV NGTLKLGADE TIGSLAGVSD
SAVDLQGYRL TTGGNNSDTL FAGEIAGTGG VTKTGTGTFT LSGTNLYTGL TDVQHGVLLL
KDGSAIVDNA AVNVGADGVL RLGNADETIG SLAGDHGSRV NLQGYTLTTG GDNSDTDFAG
KIIGTGGLIK KGIGYFMLCG TNTYSGVTDI QAGTLQLNGG SAIIDTGAVT VAAAGTLKLG
ADETVGSLAG VSGSHLDLQT FTLTSGDANN TGFAGAISGA GGLTKQGTGI FTLSGDNVYA
GGTDLNEGTL AAGSNTALGT GALSMADGTT LLAAASVALA NNVTLAAGME TVNTQAFSMT
LSGDITGEGK LIKQGAGTLT LDGSNSYTGG TLVSAGLLKG NTGSLQGDIE NNAGLEFDQS
FDGTYAGALS GTGNLAKSGT GALSLSGGVS QADFSIENGA VTNSAAMTLS GSIDLSAGTI
LNNGVGGSIT TVSGINGSNG VDRIENSGFI TSDIELGDGN DLLDNSGTLV AANKVDLGSG
DDEMTVSGHA LISEVALLDG GAGTDTLVFD GWTGNPEDGK GYLGAQVENW ENVQLTNNSM
VHLGVGAMPR TLGLGELSIE AGSTIFAYGA SPGTCTQSGN VINGGMITLI DPVKTGGDDD
SLTIVGNYTG TGTLGLDVNL GTGGYDKFII DGAASGKTTV VLQEVGDSSV LIRDSKLGLI
SVGKGGTDSF IPGEYHYGAS IYDFNMTYDA GTESYLLSNF ILRNYQETVA VLHGVMPFIE
RMGSESVSRF HERTNEGCGW WSRAYGSDYQ LDINGRAGSS LNGETAGMQV GADLGSGCQS
DGLGWNAGVF AGTGYGNADV AGFNTDKAGE LKDYAYSMGL YAGVRASESF WINAVALATY
HDLELNIVEG AEQFNRNVWS MTASLEAGFT LPLSDSFRLE PQTQLIYQHT GDLTVTRPDI
GEASLLSHDG LIGRLGIAGI AGNSRTEATP FFEVNAVKEF SGDTEVLYVR NNETLKTTPD
TLFVGGALGI RREAGEKEGL GYFIKGEAMF GVDSGSSSHT YGLSAGISKA F
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