| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2345 |
|---|
| Symbol | |
|---|
| ID | 4569681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2720777 |
|---|
| End bp | 2721559 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639766903 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_912757 |
|---|
| Protein GI | 119358113 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.544922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGC TTTTACAATC GCTTGCGTTA CAGAAGAGAG TGATCGGCGC GCTGCTGATG
CGCGAAACCA TTACCCGGTA CGGCAGGAAT AACATCGGCT TTCTCTGGCT TTTTATCGAA
CCGGCACTTT TTACTGTCAT GATTACGATC GTCTGGCACT TCACGAGAGC AGGACGTGTT
ACCGGCATTC CCATTACAGC TATGGCCGTC ACCGGATATG CCTCGATACA GCTCTGGCGA
AATATTGTCA ACAGGGCCAA AAACGCTGTG TCGGCAAATA ATGCGATCAT GTACCATAGA
AACATCCATG TGCTCGATGT TTTTATATCG CGCATTGTGC TTGAAATGTT CGGCTCCATA
ACCTCATTCA TTGCGCTCAG TATCATATTC ATCAATATCG GATGGATGGA TCTTCCTCAA
GATCCACTCA AGATTATACT TGCCTTGTTG CTTTTATCAT GGTTCGGCGC TTCGCTTGCC
CTTATTATCG GTTCGCTCAA CACACGTTTT GAAGTAACCG ACAGGATATG GAAACCGCTG
TCGTATGGCC TGTTTCTTCT TTCCGGCCTG TTCTTTATTG TGGACTGGCT CTCCCCTGAT
GCTCAGCGTA TTGTTCTTCT TTTTCCGATG GCGCATGGTC TCGAATTGTT GCGAGACGGG
TATTTCGGCA GTATGTTTAC CGCACATTAC GATATGGCAT ACATGGCTCT CTGCTGTCTG
GGTCTTACGC TGTCCGGGCT GTTTCTTGTC GATGGCCTGA GCCGGAGGGT CGAGCCCGAA
TGA
|
|---|
| Protein sequence | MKELLQSLAL QKRVIGALLM RETITRYGRN NIGFLWLFIE PALFTVMITI VWHFTRAGRV
TGIPITAMAV TGYASIQLWR NIVNRAKNAV SANNAIMYHR NIHVLDVFIS RIVLEMFGSI
TSFIALSIIF INIGWMDLPQ DPLKIILALL LLSWFGASLA LIIGSLNTRF EVTDRIWKPL
SYGLFLLSGL FFIVDWLSPD AQRIVLLFPM AHGLELLRDG YFGSMFTAHY DMAYMALCCL
GLTLSGLFLV DGLSRRVEPE
|
|---|
| |