| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2344 |
|---|
| Symbol | |
|---|
| ID | 4569680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2720127 |
|---|
| End bp | 2720780 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639766902 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_912756 |
|---|
| Protein GI | 119358112 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.268315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTG TCAATAATAT TGTCAAACGT TATAAAACAA GGACCGGCTA CAACACCGTA
CTCGATGGCA TTTCGTTTTC CGTTGAGAAA GGCGAGAAAA TAGGAATACT TGGCAGAAAC
GGAGCAGGGA AGTCAACGTT GATCCGTCTT CTGGGCGGTA TCGAACATCC GGATTCCGGA
ACGATCGAAC GCCGCATGAA CGTTTCCTGG CCTCTGGCTG CAAAAGGCGG ATTTCAGGGA
TCGTTGACAG GCGCAGACAA CCTTCGCTTC ATTTGCCGGA TTTATGGTGT CGATTATGCT
GATAAAATGA AGTTTGTCGA AGAGTTTGCA GAGCTTGGCC AATATATGCA CGAGCCATTG
AAAACATACT CGGCCGGCAT GCGGGGTCGT TTGGCATTCG CTCTTTCCAT GGCCATAGAA
TTCGACTGTT ATCTTATCGA CGAAGCCATG TCAGCCGGAG ATGCCCGCTT CCGTGATAAA
TGTCGTTATG AACTGCTTGA AAAACGGGGT GACCGGTCGA TCATTCTTGT ATCGCACGAA
CCAAAACAGA TGCGTCAATT CTGCACGGTC TTTTATGTGC TTCTGGACGG CAAGATAATT
CGTTTCGACG ACGGTGATAA AGCATACGGG TTTTATAAAA AAAATTTCAA CTGA
|
|---|
| Protein sequence | MIVVNNIVKR YKTRTGYNTV LDGISFSVEK GEKIGILGRN GAGKSTLIRL LGGIEHPDSG
TIERRMNVSW PLAAKGGFQG SLTGADNLRF ICRIYGVDYA DKMKFVEEFA ELGQYMHEPL
KTYSAGMRGR LAFALSMAIE FDCYLIDEAM SAGDARFRDK CRYELLEKRG DRSIILVSHE
PKQMRQFCTV FYVLLDGKII RFDDGDKAYG FYKKNFN
|
|---|
| |