Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2159 |
Symbol | |
ID | 4570760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2500472 |
End bp | 2502283 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639766734 |
Product | ABC transporter related |
Protein accession | YP_912588 |
Protein GI | 119357944 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.912689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAGC ATCACGACAA ACAACGAGAT AGCGAGAGCG GTGGCGCTGC GGGAACATGG TTGCGCGTAA GGCGTCTGGC GGCTTATATT CTTCCTTACC GAAGGAAGTT TATTTTTGCC TGTGTCGCCA TGCTGCTTTC GAGCTTGCTT GGGCTTGCTT TTCCCTATGT TACCGGTACG CTTGTTGATG CTGCGCTACG GGGTAGTTCG GCAGGTTGGG CGAAGAGTAT CGATATGATT GCGCTTCTTT TGGTTCTGGT TCTGGCGCTC CAGTCTTTTT TTTCGTTTTT TCAGCTTGTC TGGTTTATCG AGGTTGGCGA AAAAACCCTG TCCGATCTGA GAAAAGATAC GTTCAGTACG CTTGTCAGGC TTCCGATGAC CTTTTTTGCC GGACGAACTA CCGGCGAACT TTCAAGCCGT ATTGCAGCGG ATCTTACTCA GATACAGGAT ACGCTGAACA CTTCGCTCTC TCAACTGCTT CGCCAGATGG CCACGCTTTT CGGCGGTATT GTTCTGATTG GCATGATATC GCTCAAGCTT ACGCTGGTGA TGATCTCCTC GTTTCCCCTG ATTGTGCTGT TTGCAGTTTT TATTGGCAAA AGAATCAGGC GTCTATCGCG CAACGCACAG GATGTGCTTG CCAGAAGCAG TGTTGTTGTT GAAGAGACGC TTCAGGGAGT TCAGAATGTC AAGTCATTTG CCAATGAGTG GTATGAAATC AGCAGGTACG GCGAGGTGAT TGATCGTTAT GTCGCTTCGG TCATAAGGGT TGCCCGTTTT CGTGGTGCGT TTCTTTCCTT TATTATTTTC GGACTTTTCG GCGCTATTGT TCTGGTTTTG TGGTACGGGT CTCGTCTTGT GCAGGAGGGT GAGATGAGCG TCGGCAATCT TACTTCGTTT CTTCTCTATA CGACCTTTAT CGGGGCCGCT ATGGGAAGTT TTGCCGATCT GTTTTCGCAG CTTCAGAAAG CGCTTGGCGC AACAGAGCGG ATCGAGGAGA TTCTTGGGGA GAAGCCTGAA CCGGTCTCTC TTTTTCCAAC GGTACGGAAC ATGGAGAATC CGGAGGCTCT CAAGGGAGAG GTAAGCATGG AGAACGTCAG TTTCAGCTAT CCAGGGCGTC CGGAACTCCC TGTGCTGAAG GGGATATCTT TTGAGGTGAA CGCAGGTCGG CGATTGGCTG TTGTAGGACC GAGCGGTTCC GGGAAATCAA CCCTGTTCGC ACTGCTTCAG CGGTTTTACG ATCCGGATGA GGGGCGAGTG CTTATTGACG GAACGGATAT CCGGGAGTAT CCCCTTTCAA CATTGAGAAG TTTGATAGCC GTTGTTCCTC AGGATATTCT TTTGTTTGGG GGATCCATCA GGGATAATAT TTCGTACGGA AAGCCGGGAG CTGGCGATGA AGAGATTTTT GCTGCCGCAA AACAGGCTAA TGCTCACGAA TTTATCATGA ACTTTCCCGA TACCTACCAT ACCCTTGTCG GTGACAGAGG GGTTCAGCTT TCCGGAGGGC AACGGCAGCG TATAGCGATT GCGCGGGCTA TATTAAGTGA CCCGGCCATT CTGCTGCTTG ACGAGGCGAC AAGTGCGCTC GATTCCGAAT CGGAACTGCT GGTGCAGGAG GCGCTTGAAC ACCTGATGCT TGAACGGACA TCGTTTATTA TTGCGCATCG TCTATCCACG GTAAGAACTG CCGACATGAT AATGGTGATC AAGGATGGAA CTGTTGTTGA GAGCGGCACG AACGAAGAGT TGCTGGAAAA AGAAGACGGG ATGTATCGCA TGCTCACCGC CCTGCAGTGC GGTTTGCAGT AG
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Protein sequence | MMEHHDKQRD SESGGAAGTW LRVRRLAAYI LPYRRKFIFA CVAMLLSSLL GLAFPYVTGT LVDAALRGSS AGWAKSIDMI ALLLVLVLAL QSFFSFFQLV WFIEVGEKTL SDLRKDTFST LVRLPMTFFA GRTTGELSSR IAADLTQIQD TLNTSLSQLL RQMATLFGGI VLIGMISLKL TLVMISSFPL IVLFAVFIGK RIRRLSRNAQ DVLARSSVVV EETLQGVQNV KSFANEWYEI SRYGEVIDRY VASVIRVARF RGAFLSFIIF GLFGAIVLVL WYGSRLVQEG EMSVGNLTSF LLYTTFIGAA MGSFADLFSQ LQKALGATER IEEILGEKPE PVSLFPTVRN MENPEALKGE VSMENVSFSY PGRPELPVLK GISFEVNAGR RLAVVGPSGS GKSTLFALLQ RFYDPDEGRV LIDGTDIREY PLSTLRSLIA VVPQDILLFG GSIRDNISYG KPGAGDEEIF AAAKQANAHE FIMNFPDTYH TLVGDRGVQL SGGQRQRIAI ARAILSDPAI LLLDEATSAL DSESELLVQE ALEHLMLERT SFIIAHRLST VRTADMIMVI KDGTVVESGT NEELLEKEDG MYRMLTALQC GLQ
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