Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2112 |
Symbol | |
ID | 4569643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2450099 |
End bp | 2450965 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639766694 |
Product | integrase catalytic subunit |
Protein accession | YP_912548 |
Protein GI | 119357904 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGC GTAAAAGCTG GATCAGCGAC AAGGGACCGT TGTCGGTATC GACCCAATGT GAACTTGCCG GAGTAACCCG GTCAGGGTAC TACGGGCAAA GCAAAAGCCT CATGCCAAAT ACTGAAGATC TGGAACTGAT GAAACTTATC GACGAGGAGT ACACCCGACA TCCGTTTTAT GGAAGCCGGC GGATGAAGCG GGTACTGCTC GCCCAAGGGC GCAAGGTCAA CCGGAAACGA GTACAGCGTC TGATGCGTAA CCTGGGGCTT GCTGGTATCG CTCCAGGGCC CAATACCAGC AAGCCGCATC CGCAGCACAA GATCTATCCA TACCTGTTGC GAGGTCTTGT CATTACCAGA CCGAATCATG TCTGGTCGAC CGATGTGACC TATTGCCGGT TACCCGGCGG CTTCATGTAT CTGACGGCCG TCATCGACTG GTATTCCCGC AAGGTGCTGG CATGGAGGCT TTCGAATTCC CTGGATAGCA GCTTCTGTGT TGATTGTCTG GAAGAAGCTA TCCGCAAGTA CGGAATGCCG GAAATCTTCA ACACCGATCA GGGTACTCAG TACACCAGCG AAGCGTTTAC CGGCGTACTC AAGAGCCATG ACATCCGCAT CAGTATGGAT GGTCGGGGTC GGGCGCTGGA CAATATCTTC GTCGAACGGC TATGGCGGAA CGTCAAGCAA GAAGACCTGT ATCTGAAAGG CTATGAGACA GCGGTCGAAA TGATGCGGGG ATTAACGGAA TATTTCCGTT TTTACAATAT CGAGCGGCCT CATCAGTCGC TGGGGTACAA AACCCCGGAC GAGGTATACG AAAGCGCAAC AGGTGGCGGT GCTCGTATCG TTGTAGTCGG AAATTAA
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Protein sequence | MKARKSWISD KGPLSVSTQC ELAGVTRSGY YGQSKSLMPN TEDLELMKLI DEEYTRHPFY GSRRMKRVLL AQGRKVNRKR VQRLMRNLGL AGIAPGPNTS KPHPQHKIYP YLLRGLVITR PNHVWSTDVT YCRLPGGFMY LTAVIDWYSR KVLAWRLSNS LDSSFCVDCL EEAIRKYGMP EIFNTDQGTQ YTSEAFTGVL KSHDIRISMD GRGRALDNIF VERLWRNVKQ EDLYLKGYET AVEMMRGLTE YFRFYNIERP HQSLGYKTPD EVYESATGGG ARIVVVGN
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