Gene Cpha266_2087 details

Gene Information

• Locus tag: Cpha266_2087
• ID: 4570435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 2419777
• End bp: 2420382
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 639766669
• Product: TPR repeat-containing protein
• Protein accession: YP_912523
• Protein GI: 119357879
• COG category: [R] General function prediction only
• COG ID: [COG4783] Putative Zn-dependent protease, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000840047
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGGTT TATTAAAACA ATTCCGGGCA GGGAAAAATC TTTTTCTTCC ACTTGTTCTT 
TTGTCAGGCC TCCTGGTTCT TGCTTCGTGC AACAAGCCCT CAAAGGAGAT CAGTTCGCTG 
CAGCAGGAGG TCTGGAAAAA TCCCGGAGAT GCTGAAGCCA GCATTAAACT CGGGACGGCT 
TACGCTCGAA ACAGGCAGTA CGCTGAAGCC GACAAGGCAT TTACCGACGC TCTCGCTCTC 
GATCCGAAAA TTGAAGAGGT CTATGCCGCG CTTGGGGCCG TGGCTTTCAA TCAGAAAAAA 
TACGATCGGG CGCTGAAGTA TTTCAACACC TACCGATCAT TCTCACCTGA TGACTCTTTA 
CGAAATTACG ATGTCGGCAA CGTCTACCTT CAGATGAAAA AATACGAACC GGCAATTGCT 
GCGTATCGAA AGGCTATTGC CAACAGCACC GCATTCGAAG AGGCATACTA TAATCTCGGC 
TTCTGTTACG CGCGTTCAGG GCGAAACGAC GAGGCGGTGG AAATTTATAA CTGGCTTGTC 
AGCAAAAACA ATTATCTTGC CGTCTCACTG AAAAACCATC TGCAAAAAAC AGATGCCGTG 
CAGTAG 

 

Protein sequence

MNGLLKQFRA GKNLFLPLVL LSGLLVLASC NKPSKEISSL QQEVWKNPGD AEASIKLGTA 
YARNRQYAEA DKAFTDALAL DPKIEEVYAA LGAVAFNQKK YDRALKYFNT YRSFSPDDSL 
RNYDVGNVYL QMKKYEPAIA AYRKAIANST AFEEAYYNLG FCYARSGRND EAVEIYNWLV 
SKNNYLAVSL KNHLQKTDAV Q