| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2054 |
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| Symbol | |
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| ID | 4568738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2379403 |
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| End bp | 2381598 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639766635 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_912490 |
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| Protein GI | 119357846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair
[COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATGGC TCTACAATCA GATGGCAATG CCCGAAACCA TTTTTCAGGC CTGGTACAAA
GTGGCATCGA ACGATGGGCG CCCGGGATGG GACAATACAT CCATTCAGGA CTACTCCCTT
CGGCTTGAAG AAAACCTGAA ATCCCTTTCG CACGCCCTGC TGACAGGAAC CTACAGGCAG
AGCCCGCTGC TGAAGCTCGT TATGCTGAAG CCTGACGGAA AAGAGCGGGT GCTTCTGATT
CCCGGTGTGA TTGACAGAGT TGCCCAGACA GCGGCATCAA TCGTGCTCTC ACCCATTATC
GAAGCGGAGC TTGGCAACTG CACCTTTGCC TACCGTCCGG GCATATCGCG TGAAGGAGCA
GCACGGGAGA TCGACCGGCT GCATCGCGAA GGGTACCAGT GGGTGCTCGA CGCCGACATC
CGCAACTTTT TCGACAATGT TCGCCACGAC CTGCTTTTTC AACGGCTTGT CGAACTTGTT
GACGACAAGG AGATGATCTC CCTGTTGCAC CGCTGGCTTA CCGCCGAAAT TGTTGACGGG
CTGAACCCCC GTACCCGCAA CACGATGGGT CTCCCTCAGG GATGCCCGAT ATCACCGGCA
CTGGCGAACC TCTATCTTGA CCGGTTTGAT GAAACAATGG AACAGCAGGG ATTCAAACTG
GTTCGTTTTG CCGACGACTA TCTTGTACTC TGTAAAACCC GTCCCAAAGC CGAAGCTGCC
CTCAAGCTCT CTGAAAGCGC GCTTGCTGAG CTGAAGCTTG AACTGCACAG CGATAAAACC
CGCATTACCA CCTTTGCCGA AGGATTCAAA TATCTCGGCT ACCTCTTTAT CCGATCGCTG
GTGATTCCCA CCAAAATGCA CCCTGAAGAG TGGTATGACA AGCTCGGCAA ATTCAGACTC
CGCAAAAAGA GCGTGCACGC CCTTCCCGCT GACCCCGAAA CCATGACCGG CGAAACATCG
CAGTTTGAAC TCGAAACCGA TCAGGGCGAA AAAATCGAAC TCTCCAAGGA GGAGCTTCTG
CAGACAGAGT TCGGCAAAAA ACTGCTCGAA AGCCTCGATA AAAAGCAGTT GAATGTTGAC
GAATTTCTTG AAAAGATCTC CAGGCAGGAC GAAGAGCGAC AGAAAGAGAA ACGGGAGGCA
CTGAAAAAAC TCTACTCCCC CTTTCTCAAT ACGCTCTATC TGCAGGAGCA GGGGAGCCTT
ATGCGCAAGG ATGGGGAGCG GTTCAGTATT GAAAAGGATG GGTCGGTCAT TAACGAAGTG
ATTGTTCGCC GCATCGAACA GGTTGTGATT TTCGGCAACG TCGCCCTCAC CACACCGGTC
ATGCAATACT GCCTGCAGAA CGAAATACCG GTCACCTTTC TTTCGCAGCA TGGCAAATAC
TTCGGCAGGC TTGAAGCAAC CACTGCCGAC AATGCTGAAA TGCAGCGCTT TCACTTTCTG
CGTTCCATAG ACGAACCCTT TGCGCTTGAA ACCGCCCGTT CCATCGTAGC GGCAAAAATC
AGCAACAGCA AAACCATGAT TCGCCGCCGA AAAACCGTGG TGCAGGATCG CGACAGCACT
CTGCAAAATA AAATGGCATA CAATCTCGAC ATCATGGCCG ATCTTGCCCT GAAAGCGGAA
GCATCCACTG ATATCGATGC GCTACGGGGG ATCGAAGGCA AGGCATCGGC ACTCTACTTC
GAATGTTACG GCATGCTTTT CAGCAAAAAC CTGCCCTTTC ACACCCGGTC GTTTCTGCGG
GTACGACGAC CGCCTACCGA TCCGGTCAAC AGTCTGCTCA GTTTCGGTTA CACCATGCTG
CACACCAACA TATTCTCGAT GGTGCAGGCA AGCGGCCTGA ACCCCTATAT CGGTTTTCTT
CACGCCGAAC GAAAAGGCAA TCCCGCTCTG GTCAACGATC TGGTCGAAGA GTTCCGCACG
ATAGTCGATT CACTCGTGCT CTACACCCTC AACCGGGGTC TTTTGCAGGA AAAAGACTTC
TACTACCGCA AAGATGAGCC CGGTTGCTTT CTGTCGAACG ACGCCCGCAA ACGGTTTTTA
AACATATTCG AAACAAGGAT GTGGCAGGAA TCCCGTGACG GCTGCACCGG CAAAACGCTC
AATTTCAGGC GGCATATCGA AAAACAGGTG AGGATCATGA GAGAGGTTAT AGCCGGAACC
CGAACGCAGT ACGACCCGTA CAAGCTACCG GTATAA
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| Protein sequence | MGWLYNQMAM PETIFQAWYK VASNDGRPGW DNTSIQDYSL RLEENLKSLS HALLTGTYRQ
SPLLKLVMLK PDGKERVLLI PGVIDRVAQT AASIVLSPII EAELGNCTFA YRPGISREGA
AREIDRLHRE GYQWVLDADI RNFFDNVRHD LLFQRLVELV DDKEMISLLH RWLTAEIVDG
LNPRTRNTMG LPQGCPISPA LANLYLDRFD ETMEQQGFKL VRFADDYLVL CKTRPKAEAA
LKLSESALAE LKLELHSDKT RITTFAEGFK YLGYLFIRSL VIPTKMHPEE WYDKLGKFRL
RKKSVHALPA DPETMTGETS QFELETDQGE KIELSKEELL QTEFGKKLLE SLDKKQLNVD
EFLEKISRQD EERQKEKREA LKKLYSPFLN TLYLQEQGSL MRKDGERFSI EKDGSVINEV
IVRRIEQVVI FGNVALTTPV MQYCLQNEIP VTFLSQHGKY FGRLEATTAD NAEMQRFHFL
RSIDEPFALE TARSIVAAKI SNSKTMIRRR KTVVQDRDST LQNKMAYNLD IMADLALKAE
ASTDIDALRG IEGKASALYF ECYGMLFSKN LPFHTRSFLR VRRPPTDPVN SLLSFGYTML
HTNIFSMVQA SGLNPYIGFL HAERKGNPAL VNDLVEEFRT IVDSLVLYTL NRGLLQEKDF
YYRKDEPGCF LSNDARKRFL NIFETRMWQE SRDGCTGKTL NFRRHIEKQV RIMREVIAGT
RTQYDPYKLP V
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