| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1845 |
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| Symbol | |
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| ID | 4571187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2124518 |
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| End bp | 2125933 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639766427 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_912285 |
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| Protein GI | 119357641 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000390204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATA CAACCAAAAA AAACCTGAAA ACCCTTGCAG CGGCAGTTTT GCTGCTCTGC
CTCGGGGCAC CTGAAACGGC GAAGGCCGGG CCGGTAACCG TGCGAGAGGC GGTTGAAAAA
GCGCTGAACA CCAACCCTGA AATAAAAGCA AGGTTTCATG CTTTTCGGGA CGTGTATGAA
GAGCAGGGCG TTGCAAACGG CGGGTACTGG CCGCGAATTG ACGCTACGGC AGGCATAGGC
AGGGAGTGGC TTCGTGGTGA AAATGTTACC GACAAGGACT ACTGGCGCAA GGGCGTTCGT
CTGGAGCTTT CCCAGATGCT GTTTGACGGA TTTTATACCT GCAATCAGGT TTGCCGGTTA
AAACACTCGG GTCAGGCACG CTATTTTGAG TTCATGGATA CCATGGAGAG CGTTGGTCTT
GAGAGTTACC GCTCTTATGC CGATGTGTTG CGGTATCGGG AGATGGTTCG TCTTGCCAAG
AGGAACTATG ATTACCATCA GGAGATTTTC AATCAGGTCA GCAGTCGCGT TCGTGCCGGT
GTAGGGGCCG GGGTTGACGT GAGCCAGATT AGCGCCCGTG TTGCTCTTGC CCAGTCGAAC
TATTTGACTG AGTTAAGCAA TCTGCACGAT GTGACGGCAC GTTTTCAGCG GATTATTGGC
GAATTGCCTG AGGAAAATAT GCAGGCAGCG CTGCTCCCTA CTGACGGCAT ACCGGCAACA
GCCTCTGATG CTCTTAAAGA TGCGTATCAG CATAACCCGG GATTTCTTGC CACGATGTCT
GACATCAATG CAGCAAAACA TGCGGTGAAG GTGCAGGAGT CCAAATTCTA TCCAAGACTC
GATTTCAAGG CTCGCCATGA CTGGTCGTGG GATCTTGATG GTATTGACGG AAGGCAGGAT
GAGAGCGTGG TTGAACTTGT CATGACCTAC AATATTCTTA ACGGTGGTTC TGATGCTGCC
GCTGTTCGTC AGTATCGCGA AAAAATGTAC CGTTCGGTTG ACATGAAAGA CAAGGCAGCT
ACCGATCTGC GCCAGACCAT GACCATTGCT TATAACGACA GGCAGATTAT CGGTCAGCAG
GTTCGTTATC TCGATGCCCA TCGTAAAAAC CTGGATCAGG TTCGCGTTGC TTATCGTGAA
CAGTTCAACA TAGGCAAACG AACCCTGCTT GATCTGCTCG ATACCGAAAA CGAGTACTAT
CAGGCACAGC GGGCTTACTA TAACGGCTTT TTTGATTTGA CGATAGCCAA TGCGAGAGCG
CTCGCCGGCA TGGGCAAATT GCTGACCACC ATGAATGTCG TTCGTGGTGA GTTGCCGAGT
CTCAAGGATA TCAATATTCC TCTGCCAAGA GTAACCGATG AGGATGTTCC GCCGGTTGAA
ATTCCCGTTC CGGTGACCAT GGCGAAGAAG TTTTGA
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| Protein sequence | MKNTTKKNLK TLAAAVLLLC LGAPETAKAG PVTVREAVEK ALNTNPEIKA RFHAFRDVYE
EQGVANGGYW PRIDATAGIG REWLRGENVT DKDYWRKGVR LELSQMLFDG FYTCNQVCRL
KHSGQARYFE FMDTMESVGL ESYRSYADVL RYREMVRLAK RNYDYHQEIF NQVSSRVRAG
VGAGVDVSQI SARVALAQSN YLTELSNLHD VTARFQRIIG ELPEENMQAA LLPTDGIPAT
ASDALKDAYQ HNPGFLATMS DINAAKHAVK VQESKFYPRL DFKARHDWSW DLDGIDGRQD
ESVVELVMTY NILNGGSDAA AVRQYREKMY RSVDMKDKAA TDLRQTMTIA YNDRQIIGQQ
VRYLDAHRKN LDQVRVAYRE QFNIGKRTLL DLLDTENEYY QAQRAYYNGF FDLTIANARA
LAGMGKLLTT MNVVRGELPS LKDINIPLPR VTDEDVPPVE IPVPVTMAKK F
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