Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1845 |
Symbol | |
ID | 4571187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2124518 |
End bp | 2125933 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639766427 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_912285 |
Protein GI | 119357641 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000390204 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA CAACCAAAAA AAACCTGAAA ACCCTTGCAG CGGCAGTTTT GCTGCTCTGC CTCGGGGCAC CTGAAACGGC GAAGGCCGGG CCGGTAACCG TGCGAGAGGC GGTTGAAAAA GCGCTGAACA CCAACCCTGA AATAAAAGCA AGGTTTCATG CTTTTCGGGA CGTGTATGAA GAGCAGGGCG TTGCAAACGG CGGGTACTGG CCGCGAATTG ACGCTACGGC AGGCATAGGC AGGGAGTGGC TTCGTGGTGA AAATGTTACC GACAAGGACT ACTGGCGCAA GGGCGTTCGT CTGGAGCTTT CCCAGATGCT GTTTGACGGA TTTTATACCT GCAATCAGGT TTGCCGGTTA AAACACTCGG GTCAGGCACG CTATTTTGAG TTCATGGATA CCATGGAGAG CGTTGGTCTT GAGAGTTACC GCTCTTATGC CGATGTGTTG CGGTATCGGG AGATGGTTCG TCTTGCCAAG AGGAACTATG ATTACCATCA GGAGATTTTC AATCAGGTCA GCAGTCGCGT TCGTGCCGGT GTAGGGGCCG GGGTTGACGT GAGCCAGATT AGCGCCCGTG TTGCTCTTGC CCAGTCGAAC TATTTGACTG AGTTAAGCAA TCTGCACGAT GTGACGGCAC GTTTTCAGCG GATTATTGGC GAATTGCCTG AGGAAAATAT GCAGGCAGCG CTGCTCCCTA CTGACGGCAT ACCGGCAACA GCCTCTGATG CTCTTAAAGA TGCGTATCAG CATAACCCGG GATTTCTTGC CACGATGTCT GACATCAATG CAGCAAAACA TGCGGTGAAG GTGCAGGAGT CCAAATTCTA TCCAAGACTC GATTTCAAGG CTCGCCATGA CTGGTCGTGG GATCTTGATG GTATTGACGG AAGGCAGGAT GAGAGCGTGG TTGAACTTGT CATGACCTAC AATATTCTTA ACGGTGGTTC TGATGCTGCC GCTGTTCGTC AGTATCGCGA AAAAATGTAC CGTTCGGTTG ACATGAAAGA CAAGGCAGCT ACCGATCTGC GCCAGACCAT GACCATTGCT TATAACGACA GGCAGATTAT CGGTCAGCAG GTTCGTTATC TCGATGCCCA TCGTAAAAAC CTGGATCAGG TTCGCGTTGC TTATCGTGAA CAGTTCAACA TAGGCAAACG AACCCTGCTT GATCTGCTCG ATACCGAAAA CGAGTACTAT CAGGCACAGC GGGCTTACTA TAACGGCTTT TTTGATTTGA CGATAGCCAA TGCGAGAGCG CTCGCCGGCA TGGGCAAATT GCTGACCACC ATGAATGTCG TTCGTGGTGA GTTGCCGAGT CTCAAGGATA TCAATATTCC TCTGCCAAGA GTAACCGATG AGGATGTTCC GCCGGTTGAA ATTCCCGTTC CGGTGACCAT GGCGAAGAAG TTTTGA
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Protein sequence | MKNTTKKNLK TLAAAVLLLC LGAPETAKAG PVTVREAVEK ALNTNPEIKA RFHAFRDVYE EQGVANGGYW PRIDATAGIG REWLRGENVT DKDYWRKGVR LELSQMLFDG FYTCNQVCRL KHSGQARYFE FMDTMESVGL ESYRSYADVL RYREMVRLAK RNYDYHQEIF NQVSSRVRAG VGAGVDVSQI SARVALAQSN YLTELSNLHD VTARFQRIIG ELPEENMQAA LLPTDGIPAT ASDALKDAYQ HNPGFLATMS DINAAKHAVK VQESKFYPRL DFKARHDWSW DLDGIDGRQD ESVVELVMTY NILNGGSDAA AVRQYREKMY RSVDMKDKAA TDLRQTMTIA YNDRQIIGQQ VRYLDAHRKN LDQVRVAYRE QFNIGKRTLL DLLDTENEYY QAQRAYYNGF FDLTIANARA LAGMGKLLTT MNVVRGELPS LKDINIPLPR VTDEDVPPVE IPVPVTMAKK F
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