Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1749 |
Symbol | |
ID | 4571111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1976830 |
End bp | 1978515 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639766332 |
Product | type I secretion system ATPase |
Protein accession | YP_912190 |
Protein GI | 119357546 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGG CGATTGCTTC ACTGTATCCC TCGTTTACGA ATACTTTTTT TTTCAGTCTG ATCGTCAATG TGCTGGTGCT TGCGCCGAGT GCCTATATGA TGGAGGTGTA TGACCGCGTT GTAAACAGTC GCAGTCATAC GACGCTCCTT ATGCTCACCA TACTCGTTAT CGGGAGCTAT CTGCTGCTCG AAGCGCTCGA ATGGGTTCGC AGACAGGTAA TGCACGGAGC AGGCCTGGGG CTTGACGCAA AGTTGCGGGA TCAGGTAATT GGCGCAATGT TTACAGCACG GTTGCAGAGC CTCTCCTCAG GAGGCACGCA AGCTTTGCGG GATCTTAAAA CCGTTTGCGA TTTCCTGGCT TCGACAGCAA TGCTTGCGAT CATTGACATG CCGCTTGCCC TGCTTGTTCT GGTTCTGATT TTTATGATGA GTCCCATGCT CGGATGGTTT GCCGTGGCAG GAGCGCTCAT GCAGTTCATG ATCGGCGTAA TCAATGAACG ACGTATCCGT GAACCTCTTC TTGCCGCAAA TCGAGGGTCT CGAAACACGC AGGCCTATGC TGACAGCGTG CTTCGTAATG CCGAGGTTAT TGAGTCAATG GGGATGCTCG ATCATATCCA CAACCGGTGG ATGAGACGTC AGCAGGATTT TCTGGTGCAA CAGGCAAAAG CCTCCGATCA TGCGGGTACA AACGCAGCCC TCTCGAAGCT TGTGCAAAGC CTTCTCGGCT CTCTTCTGCT TGGCGTTGGT TGCTGGCTGA CTCTCAAAGG TGAGCTTCAA GGATCAGGCA TGATTGTATC CTCGATTCTC GGAGGCAGGG TGCTTTCGCC GCTCGTGCAG ATCATCGGTA ACTGGCGGCA GGTTGAAGGA GCGTTCGAAG CCTTCACCCG ACTCGATCTG ATGCTTAAGC AGTATCCTGT TCCGGAAAAA AGAATGGCGC TGCCGCCACC AACAGGATCG CTTGTTGTCG ACAATCTCAT TGCCGGAGCA CCCGGCAGTA AGTCGCAGAT CCTGAAAGGG ATCAGTTTCA GGCTGGCTCC CGGTGGTACA TTGGCCATTG TAGGGCCATC GGCATCAGGT AAAACCACCC TTGCGCGACT GCTTGTCGGT ATCTGGCCGG CAATACAGGG CAAGGTAAGG CTTGACGGCA ACGACATCTA CCAGTGGGAT AAAGAGGAAC TTGGCCAATA TATCGGGTAT CTGCCTCAGA ACGTTGAACT GTTTGATGGA ACTATCGCTG AAAACATAGC CCGATTCGGT GAACCGGATG AGGCAAAAGT TGAGGCTGCT TGCAGGATGG TTGGGCTTGA GCGCTTTATC GAACAACTTC CGCAAGGGTA CGATACCCGG ATCGGCGACG ACGGCTCTTT TCTTTCAGGT GGAGAGAGGC AGCGAGTTGC GCTGGCCCGA TCGGTATACG GTATGCCGAA GTTTATCGTG CTCGATGAAC CCAACGCAAG CCTTGACGAA GCAGGTGATG CCGCCCTGCT CAGGGCTTTG CAGTTGCTGA AAACCCTGGG CACAACCATC ATCGTCATAA CCCATCGATT GAATATTCTG GGCGCAACAG AACATATGCT TGTGCTTGTT GATGGCCAGG TACAGCGTTT CGGCACCTCC GAGGAGGTGC TTGCCGCCCT GCAGTCATCT CAGGATGCGC GACCTGCATC GAACGGGAAA CCATAG
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Protein sequence | MSEAIASLYP SFTNTFFFSL IVNVLVLAPS AYMMEVYDRV VNSRSHTTLL MLTILVIGSY LLLEALEWVR RQVMHGAGLG LDAKLRDQVI GAMFTARLQS LSSGGTQALR DLKTVCDFLA STAMLAIIDM PLALLVLVLI FMMSPMLGWF AVAGALMQFM IGVINERRIR EPLLAANRGS RNTQAYADSV LRNAEVIESM GMLDHIHNRW MRRQQDFLVQ QAKASDHAGT NAALSKLVQS LLGSLLLGVG CWLTLKGELQ GSGMIVSSIL GGRVLSPLVQ IIGNWRQVEG AFEAFTRLDL MLKQYPVPEK RMALPPPTGS LVVDNLIAGA PGSKSQILKG ISFRLAPGGT LAIVGPSASG KTTLARLLVG IWPAIQGKVR LDGNDIYQWD KEELGQYIGY LPQNVELFDG TIAENIARFG EPDEAKVEAA CRMVGLERFI EQLPQGYDTR IGDDGSFLSG GERQRVALAR SVYGMPKFIV LDEPNASLDE AGDAALLRAL QLLKTLGTTI IVITHRLNIL GATEHMLVLV DGQVQRFGTS EEVLAALQSS QDARPASNGK P
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