Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1682 |
Symbol | |
ID | 4569894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1909724 |
End bp | 1910956 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639766268 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_912127 |
Protein GI | 119357483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000183641 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG TATTACACTC TATCGTAGCA GTGCTGCTCG CAACATCGTT TTCCAATATC TCCCTGGCGG CTGATGTTAT CAGAATTGCC ATTACAGGGC CCTTTTCAGG CGGCTCCGCA CCGATGGGCG TGTCCATGAG AAATGGCGCC AAACTGGCTT TTTCTAAAAT CAACCAGAAC GGCGGCATTA TGATTGCCGG AAAAAAAACG AAAGTTGAGA TTATCGAACG CGACGATGAA GGCAAAAACG ATCGCGGCGC ACTTATTGCC CAGGAAATAT CATCGATGAA TAACGTTTCG GCTGTTATCG GAACGGTTAA CACCGGCGTA GCCGTCATGG GTGACAAGTA TTATGTTGAA AAAAACATTG TCAAAATCAT TACGCCGGCA GCTGGCAGCG CATCAATGAC GCAATGGAAC AAAACCGGTG TTAAAAATCT GCCGATTTTC CGTTTTGCTG CGCATGATGG CATCCAGGCA CAGATGGTGG TAGAACAAGC ATTGAAACTT GGTATCAAAA AAGTCGCAAT ATTATATGAT GCAACCAATT ATGGTGTTTC AGGACGTGAC GATCTGACCA GGCAGATCAA TAAACAGGGC AATAAGCTTC AAGTGATGGC TCTCGAAAAA TTTGCCATCG GTGACAAGGA TATGACCGGT CAGCTCATTA AAGCAAAGGC TGCCGGTGCC CAGGCCATCC TGATATGGGG AATCGGACCT GAACTGGCAG CAGTTGCCGC CGGAAAGGAA AAACTTGGCT TCAAAGTACC GATGATTGGT GGATGGACGC TCTCCATGAG CAATTTCATC GATACAGCCG GGCCCGCAGG CAATGGCGCT CTTATGCCTC AAACATTTAT TGAAGACCCC TCCATAGCAA GAGCACGGCC CTTTATTCAG GCATATCATA CAATGTACGG CGGCTCAAAA ATCCCTTCTC CGGTATCCGC TGCCCAGGGT TATGACGCTG CCTTGCTGCT TGCTCAGGCC ATTCATGAAG CCGGATCATC CAACCCCTCA AAAATCAGAG TTGCTCTCGA AAACCTTAAA GTCACCGTCA AAGGATCGAT TGCCGACTGG AAAAAACCAT GGTCAACGTG GAACCCTGCC AATGTCGAGA GCCATGAAGC ATTCCGTCGA TCAACAACAG TGATGGGTCA GGTGAAAAAC GGACGGGTGG TACTGGCCAA TTCTGCTGAC AAGGCTGTTC TGGAAAGATC CGGCAGCAGG TAA
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Protein sequence | MRKVLHSIVA VLLATSFSNI SLAADVIRIA ITGPFSGGSA PMGVSMRNGA KLAFSKINQN GGIMIAGKKT KVEIIERDDE GKNDRGALIA QEISSMNNVS AVIGTVNTGV AVMGDKYYVE KNIVKIITPA AGSASMTQWN KTGVKNLPIF RFAAHDGIQA QMVVEQALKL GIKKVAILYD ATNYGVSGRD DLTRQINKQG NKLQVMALEK FAIGDKDMTG QLIKAKAAGA QAILIWGIGP ELAAVAAGKE KLGFKVPMIG GWTLSMSNFI DTAGPAGNGA LMPQTFIEDP SIARARPFIQ AYHTMYGGSK IPSPVSAAQG YDAALLLAQA IHEAGSSNPS KIRVALENLK VTVKGSIADW KKPWSTWNPA NVESHEAFRR STTVMGQVKN GRVVLANSAD KAVLERSGSR
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