Gene Cpha266_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1669 
Symbol 
ID4571049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1897022 
End bp1898284 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID639766255 
Producthypothetical protein 
Protein accessionYP_912114 
Protein GI119357470 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTGCG TTATGAATGA AAAAGGCATG AGTTTACGTG ACCTCCTTTC ACAGGCGATC 
TACTCACTGG TCGCAAACAA GCTCCGCTCC CTGTTGACAA CAATGGGCGT TGCGGTTGGC
GTGTTTTCGA TTATTGCAGT CATGACCGCT CTCCAGGCCA TCGAACAAAG CGTGGAATCA
GGCTTGACCA GTCTTGGTGC AAACACCTTC CAGATCCAGA AACTTCCAGC GACCTTTTTT
GGCGGCGGGC ACTCCAGAAG TCTCTATGCC AACAGAAAAG ACATCTCCTA CAAAGAGGGC
TTGATGTTCA GAAAACTCAT GGAATCAAGA ACTAAAACCA TAGGGTTCAT GATCTCAAGC
CAGGCAAAAC AGGCAAAATA TGCCAACCGT TTCACAAACC CCGATGTCAT TCTGACCGGA
GCTGACGATC ACTTTGCGAT TGCAAACGGC TACGGCATCC GCCTGGGAAG AAACTTCAAT
AACAGCGACA TCCAGTATGC CCGAAATTTC GCACTGCTTG GCAGTGAAGT CTCTGAATCA
CTCTTTCCTG CCACAGAAAA TCCTCTTCAC AAATCAATCA AAATAAACGG AGAGGTCTTC
ACCGTTGCAG GTGTTTTTGA AAAAAAAGGC GCCGCTTTCG GCCAGAGTCA GGACAATCTG
GTATTGATCC CCATTACCCG GTACCTTGAT CATATCAACG AACAAAGCAG CCTGAACATA
ACCATCGAAG CGATCTCGCA GAAACAGTAC AAGGAAACCA TCGACCAGTC GATCGGAGCC
ATGAGAATCG CACGCGGGCT CACCGTAAAA GAGCCCAATG ATTTTGAAAT CAGAACCAAT
GAGTCTCTGA TTGATTCGTT CCGGGATATT CAGCGGGCAA TAACCACCGG TGCATTTATT
ATCAGCTTTA TGGCGCTTCT TTCCTCCGGG GTTGGAATCA TGAATATCAT GCTGGTCAGC
GTTACTGAAC GAACAAAAGA GATCGGCATC CGAAAATCCC TTGGAGCGCC ACAACAGAGC
ATCCTGCGAC AATTCCTGCT TGAAGCAGTC ATTCTCTCCG TAGCCGGCGG TCTTATCGGC
ATTATCACCG GCGTCAGCGC GGGAAATATT GTTGCCCTCA AGTTTAATCT GAACGCAATA
TTTCCATGGC TGTGGATATT CATTGCCATG GCAGTCTGCT CGATTATTGG AGTGACCTTC
GGACTTTTAC CCGCATGGAA AGCCGCAATG CTTGACCCTG TTGAAGCACT TCATCCGAAA
TAG
 
Protein sequence
MHCVMNEKGM SLRDLLSQAI YSLVANKLRS LLTTMGVAVG VFSIIAVMTA LQAIEQSVES 
GLTSLGANTF QIQKLPATFF GGGHSRSLYA NRKDISYKEG LMFRKLMESR TKTIGFMISS
QAKQAKYANR FTNPDVILTG ADDHFAIANG YGIRLGRNFN NSDIQYARNF ALLGSEVSES
LFPATENPLH KSIKINGEVF TVAGVFEKKG AAFGQSQDNL VLIPITRYLD HINEQSSLNI
TIEAISQKQY KETIDQSIGA MRIARGLTVK EPNDFEIRTN ESLIDSFRDI QRAITTGAFI
ISFMALLSSG VGIMNIMLVS VTERTKEIGI RKSLGAPQQS ILRQFLLEAV ILSVAGGLIG
IITGVSAGNI VALKFNLNAI FPWLWIFIAM AVCSIIGVTF GLLPAWKAAM LDPVEALHPK