Gene Cpha266_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1638 
Symbol 
ID4568583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1865113 
End bp1865772 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID639766222 
Productthymidylate kinase 
Protein accessionYP_912083 
Protein GI119357439 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATAA CCTTTGAAGG AATCGATGGA GCCGGAAAAT CCACGCAAAT AAAAAAGCTT 
CAAACCGTGC TCAACAAAGC GGGCGTGGAG TCGGTAACAC TGCGGGAACC GGGCGGAACC 
GAAGTTGCAG AAAAAATCCG AAGCATTCTT CTCGAAAGCC GCCACGAAAT CAGCGCGGTC 
GGAGAACTTC TGCTGTTTTC GGCAACACGG GCAGAACTCG TTCAACAGGT AATCATCCCT 
GCGCTGCAGA CAGACGCCGT TGTTATCCTT GACAGATTTT ATGATTCCAC AAGGGCCTAT 
CAGGGCTATG GACGCGGCAT CGACCTCACT ATTCTTGAAA CGATCATCGC ATTCTCGACG 
TTTAATCTGA TACCTGACGT GACATTTTAT CTTGACATCA AGCCCGAGGA TGCCATGATC 
AGAAAAAATT CAAAAAAATC TCTTCCGCTG GCATTCGAAA ACAGTGATCT TGACCGGATG 
GAAAGATCCG GTCTTGAGTT TTACAGCAAG GTCAGAAACG GCTATTTCGA AATAATCCGT 
TCAGAACAAC ACCGTTTTAA AGTTTTGAAT GCCCTTGAAC ACCCGGATGA CCTTCACCGT 
CAGATCCTCG AAACGCTGCG AAAAAAAAAA CCAGCTCTGA AGGCACTCAA CCGTTACTGA
 
Protein sequence
MLITFEGIDG AGKSTQIKKL QTVLNKAGVE SVTLREPGGT EVAEKIRSIL LESRHEISAV 
GELLLFSATR AELVQQVIIP ALQTDAVVIL DRFYDSTRAY QGYGRGIDLT ILETIIAFST 
FNLIPDVTFY LDIKPEDAMI RKNSKKSLPL AFENSDLDRM ERSGLEFYSK VRNGYFEIIR 
SEQHRFKVLN ALEHPDDLHR QILETLRKKK PALKALNRY