Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1633 |
Symbol | |
ID | 4568578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1861241 |
End bp | 1862293 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639766217 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_912078 |
Protein GI | 119357434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.784854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATC AGCCGATAAA AAACGAATCC CTTGACGTTC AGGAACTGCC CCCGGAACCC AAAAAGCTTG CTATTCAGGT AAGTCGCGTA CAGATCCCGA TGCGCATCGA CAAATACCTC ACCCAGCAGG TGGAAAATGC CACCCGCAAC AAGGTGCAGG AAGCCATCAC TGAAGGGCGG GTACTGGTAA ACGGCAAGCC CGTAAAATCA AATTACAAAA TCAAGTCATG CGACCTGATT CAGATAACCT TTCTGCGTCC TCCTGCGCCT GAAATGGCTC CCGAAAATAT TCCGATCGAT ATTATTTATG AAGACGCAGA CCTCATGGTT GTCAACAAGG AGGCGGGAAT GGTTGTCCAT CCTGCATTTG GCAACTGGAC CGGAACGCTT GCCAATGCGA TTCTGCATCA TATCGGCAAC GATACCGGAG AGCTCGACTG CTCCCTTCAG CGACCCGGCA TTGTACACCG GCTCGACAAA GATACCTCGG GTCTGATTAT CATTGCAAAA AATCCTCTTG CCTTGCAGCG CCTTGCCCGC CAGTTTGCCC AGCGACAGGT TGAAAAAATT TACCACGCTC TGGTGTGGGG GGTACCGGAA CCGGCTTCAG GCACCATAAA AACCAATATC GGGCGATCAA AAAAAAACCG GAAGGTCATG ACCACTTATC CCTTTGAAGG TATTGACGGC AAACATGCGA TAACCGACTA CGCCGTCATT GAAGACTTAC GATACTTTTC GCTTGTGTCA ATCAAACTCC ATACAGGGAG AACACATCAG ATACGGGTAC ATCTGCAACA TCTCGGCCAC CCAATCCTCG GGGATACTGT TTATGGGGGC GCCTCCATAC GCACGCTCCC GTTCAGCAAA AGCGAGAGTT TCATTAAAAA CCTGCTTGAA ATAATACCGC GCCAGGCGCT CCATGCCCAG ACGCTGCGCT TCACCCAGCC ATTAACGCAT GAACCGCTCT CCTTTACGGC TCCCCTGCCC GGAGACATGA TAAATGCCTG CCTGAAAATA AAAACGCTCC TCAAGGATGC ATTCCCTCTA TAA
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Protein sequence | MLNQPIKNES LDVQELPPEP KKLAIQVSRV QIPMRIDKYL TQQVENATRN KVQEAITEGR VLVNGKPVKS NYKIKSCDLI QITFLRPPAP EMAPENIPID IIYEDADLMV VNKEAGMVVH PAFGNWTGTL ANAILHHIGN DTGELDCSLQ RPGIVHRLDK DTSGLIIIAK NPLALQRLAR QFAQRQVEKI YHALVWGVPE PASGTIKTNI GRSKKNRKVM TTYPFEGIDG KHAITDYAVI EDLRYFSLVS IKLHTGRTHQ IRVHLQHLGH PILGDTVYGG ASIRTLPFSK SESFIKNLLE IIPRQALHAQ TLRFTQPLTH EPLSFTAPLP GDMINACLKI KTLLKDAFPL
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